RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 BACH1O14867 736 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 PER2O15055 1255 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 GPR182O15218 404 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 HBP1O60381 514 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 RXRAP19793 462 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 KLRC1P26715 233 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 DUSP6Q16828 381 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 FAM160B1Q5W0V3 765 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 SUSD6Q92537 303 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 ADAM2Q99965 735 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMEM260Q9NX78 707 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 COL1A2P08123 1366 aa13.28□□□□□ -0.28
CTDNEP1-212ENST00000576613 ATG7O95352 703 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 LAG3P18627 525 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 TCF15Q12870 199 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 PPP1R18Q6NYC8 613 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZBTB33Q86T24 672 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 FANCBQ8NB91 859 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 ST3GAL5Q9UNP4 418 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 LZTS1Q9Y250 596 aa13.27□□□□□ -0.29
CTDNEP1-212ENST00000576613 IGKV6D-21A0A0A0MT36 114 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 MGEA5O60502 916 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ARP10275 920 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 NAPAP54920 295 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ERVFC1P60507 584 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ITGB3BPQ13352 177 aaPredicted RBP13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMEM184AQ6ZMB5 413 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ASIC4Q96FT7 647 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 SNX27Q96L92 541 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 NOC2LQ9Y3T9 749 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-212ENST00000576613 C9IYK1 514 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 FSCN2O14926 492 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 HOXA2O43364 376 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 HOXB8P17481 243 aaPredicted RBP13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 PPM1AP35813 382 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF76P36508 570 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 TECP42680 631 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ADCY7P51828 1080 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 AP3B2Q13367 1082 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF484Q5JVG2 852 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 PLPP4Q5VZY2 271 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 WWC2Q6AWC2 1192 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 MIS18BP1Q6P0N0 1132 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 PDXDC2PQ6P474 469 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 RAB11FIP4Q86YS3 637 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMEM40Q8WWA1 233 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 MRPS27Q92552 414 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ANO3Q9BYT9 981 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 GLT8D2Q9H1C3 349 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 NGRNQ9NPE2 291 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF302Q9NR11 478 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
CTDNEP1-212ENST00000576613 EVPLQ92817 2033 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 MEIS1O00470 390 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 GFRA3O60609 400 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CCNE2O96020 404 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 FGFR1P11362 822 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 AVPR2P30518 371 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 SREBF1P36956 1147 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 NUBP1P53384 320 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms