RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZNF76P36508 570 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 CARSP49589 748 aaKnown RBP9.79□□□□□ -0.84
NCBP3-204ENST00000574911 SLC15A2Q16348 729 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 DCAF17Q5H9S7 520 aaPredicted RBP9.79□□□□□ -0.84
NCBP3-204ENST00000574911 OTOP1Q7RTM1 612 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 LRRC57Q8N9N7 239 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 USP38Q8NB14 1042 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.848e-8■■□□□ 12.2
NCBP3-204ENST00000574911 KRT12Q99456 494 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 ZMYM2Q9UBW7 1377 aa9.79□□□□□ -0.84
NCBP3-204ENST00000574911 HSF2BPO75031 334 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 PPFIA4O75335 1185 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 SLITRK3O94933 977 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 KIF4AO95239 1232 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 DNA2P51530 1060 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 GUCY2DQ02846 1103 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 KCNA1Q09470 495 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 PPFIA1Q13136 1202 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 PAK2Q13177 524 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 RPS6KA1Q15418 735 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 IFI16Q16666 785 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 C1orf186Q6ZWK4 172 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 MREGQ8N565 214 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 CASKIN2Q8WXE0 1202 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 TAF4BQ92750 862 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 PBKQ96KB5 322 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 TDRD3Q9H7E2 651 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 QTRT2Q9H974 415 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 EPB41L5Q9HCM4 733 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 FEZ2Q9UHY8 353 aaPredicted RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 RRP15Q9Y3B9 282 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 SCN9AQ15858 1988 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 CLIC2O15247 247 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 FAM153BP0C7A2 387 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 PPP2R5CQ13362 524 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 CTTNQ14247 550 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 FAM153CQ494X1 144 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 TTMPQ5BVD1 217 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 ALKBH5Q6P6C2 394 aaKnown RBP9.78□□□□□ -0.84
NCBP3-204ENST00000574911 SLC5A5Q92911 643 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 DYDC2Q96IM9 177 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 ZIM3Q96PE6 472 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 TSPYL1Q9H0U9 437 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 POLD4Q9HCU8 107 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 FAM153AQ9UHL3 310 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 NFU1Q9UMS0 254 aa9.78□□□□□ -0.84
NCBP3-204ENST00000574911 A0A0A6YYK5 440 aaPredicted RBP9.77□□□□□ -0.84
NCBP3-204ENST00000574911 ZSCAN5CA6NGD5 496 aaPredicted RBP9.77□□□□□ -0.84
NCBP3-204ENST00000574911 MYO1CO00159 1063 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 PSMD10O75832 226 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 FLOT1O75955 427 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 TNNC1P63316 161 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 TCERG1LQ5VWI1 586 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 STYK1Q6J9G0 422 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 SLFN11Q7Z7L1 901 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 IQCKQ8N0W5 287 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 ACTRT1Q8TDG2 376 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 SCFD2Q8WU76 684 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 ARL8AQ96BM9 186 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 GCNT4Q9P109 453 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 INTUQ9ULD6 942 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.84
NCBP3-204ENST00000574911 BRWD3Q6RI45 1802 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 UBE4BO95155 1302 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 SFI1A8K8P3 1242 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 BHMG1C9JSJ3 638 aaPredicted RBP9.77□□□□□ -0.85
NCBP3-204ENST00000574911 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.85
NCBP3-204ENST00000574911 KCNK3O14649 394 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 RAD51CO43502 376 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 FAM13AO94988 1023 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 FERP16591 822 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 NMT1P30419 496 aaKnown RBP9.77□□□□□ -0.85
NCBP3-204ENST00000574911 PSMC2P35998 433 aaKnown RBP9.77□□□□□ -0.85
NCBP3-204ENST00000574911 IRAK1P51617 712 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 SKOR1P84550 965 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 TRAF1Q13077 416 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
NCBP3-204ENST00000574911 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 KIAA1755Q5JYT7 1200 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 GJB7Q6PEY0 223 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 OLIG1Q8TAK6 271 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 PIGOQ8TEQ8 1089 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 IFT81Q8WYA0 676 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 FIZ1Q96SL8 496 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 SLX4Q8IY92 1834 aa9.77□□□□□ -0.85
NCBP3-204ENST00000574911 ESYT3A0FGR9 886 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 GFPT2O94808 682 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 MUTP22033 750 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 NOP2P46087 812 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 NPEPPSP55786 919 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RNASE9P60153 205 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 LRCH2Q5VUJ6 765 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 DNAAF5Q86Y56 855 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 TPH2Q8IWU9 490 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CD302Q8IX05 232 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 FAM186BQ8IYM0 893 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms