RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 A6NJR5 290 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 HOXD8P13378 290 aaPredicted RBP26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 IDEP14735 1019 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 GRK4P32298 578 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 DGKDQ16760 1214 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 KMT5BQ4FZB7 885 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 C1orf186Q6ZWK4 172 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 CEP170P1Q96L14 293 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 REEP2Q9BRK0 252 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 CENPFP49454 3210 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 BMP6P22004 513 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 STX1AQ16623 288 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 TSPY26PQ9H489 355 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 POLD4Q9HCU8 107 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 ARID2Q68CP9 1835 aa26.73■■□□□ 1.87
ATPAF1-213ENST00000574428 USO1O60763 962 aaKnown RBP26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 BEX3Q00994 111 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 MORC3Q14149 939 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 GIT2Q14161 759 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 DPCR1Q3MIW9 517 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 MTERF2Q49AM1 385 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 C16orf70Q9BSU1 422 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 RMND1Q9NWS8 449 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 ERAP1Q9NZ08 941 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 SYNRGQ9UMZ2 1314 aa26.72■■□□□ 1.87
ATPAF1-213ENST00000574428 RARBP10826 455 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 CPT1AP50416 773 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 NLRP12P59046 1061 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 PLCB4Q15147 1175 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 UNC13DQ70J99 1090 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 FAM167AQ96KS9 214 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 CYP26B1Q9NR63 512 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 NRBP2Q9NSY0 501 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 EXOC1Q9NV70 894 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 PTPN22Q9Y2R2 807 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 HSPA8P11142 646 aaKnown RBP26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 SLC26A2P50443 739 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 ANO6Q4KMQ2 910 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 SH3TC2Q8TF17 1288 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 ATP8B4Q8TF62 1192 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 KCND2Q9NZV8 630 aa26.71■■□□□ 1.87
ATPAF1-213ENST00000574428 MYADML2A6NDP7 307 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 RSPH10B2B2RC85 870 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 C6orf222P0C671 652 aaPredicted RBP26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 RSPH10BP0C881 870 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 KCNB1Q14721 858 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 FSCN1Q16658 493 aaKnown RBP26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 TRIML1Q8N9V2 468 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 HPS3Q969F9 1004 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 NIFKQ9BYG3 293 aaKnown RBP26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 RNPEPQ9H4A4 650 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 ZHX3Q9H4I2 956 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 PANK4Q9NVE7 773 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 ANO10Q9NW15 660 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 TRPC6Q9Y210 931 aa26.7■■□□□ 1.86
ATPAF1-213ENST00000574428 PVALEFA0A1B0GWK0 134 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 PGK1P00558 417 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 C11orf57Q6ZUT1 292 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 MAEAQ7L5Y9 396 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 SMYD4Q8IYR2 804 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 BBXQ8WY36 941 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 DNAJC25Q9H1X3 360 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 ZNF215Q9UL58 517 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 H3BRB1 525 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 RHOBTB3O94955 611 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 GUCY2CP25092 1073 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 GJA9P57773 515 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 COASYQ13057 564 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 BRDTQ58F21 947 aaPredicted RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 CCDC65Q8IXS2 484 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 CCDC47Q96A33 483 aaKnown RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 TUT1Q9H6E5 874 aaKnown RBP26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 GRPEL1Q9HAV7 217 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 XPNPEP3Q9NQH7 507 aa26.69■■□□□ 1.86
ATPAF1-213ENST00000574428 TBCAO75347 108 aaKnown RBP26.68■■□□□ 1.86
ATPAF1-213ENST00000574428 MRE11P49959 708 aa26.68■■□□□ 1.86
ATPAF1-213ENST00000574428 UPF3AQ9H1J1 476 aaKnown RBP26.68■■□□□ 1.86
ATPAF1-213ENST00000574428 DDX20Q9UHI6 824 aaKnown RBP26.68■■□□□ 1.86
ATPAF1-213ENST00000574428 GDAQ9Y2T3 454 aa26.68■■□□□ 1.86
ATPAF1-213ENST00000574428 FRMD3A2A2Y4 597 aa26.67■■□□□ 1.86
ATPAF1-213ENST00000574428 HIP1RO75146 1068 aa26.67■■□□□ 1.86
ATPAF1-213ENST00000574428 MYL3P08590 195 aa26.67■■□□□ 1.86
ATPAF1-213ENST00000574428 TARBP2Q15633 366 aaKnown RBP26.67■■□□□ 1.86
ATPAF1-213ENST00000574428 SFI1A8K8P3 1242 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 HSPA1AP0DMV8 641 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 HSPA1BP0DMV9 641 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 ZNF658Q5TYW1 1059 aaPredicted RBP26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 CEP89Q96ST8 783 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 SPC25Q9HBM1 224 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 ZBTB42B2RXF5 422 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 FAM13AO94988 1023 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 F2P00734 622 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 LBX1P52954 281 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 EHHADHQ08426 723 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 MAPK7Q13164 816 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 GNASQ5JWF2 1037 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 DAW1Q8N136 415 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 HMX1Q9NP08 348 aaPredicted RBP26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 GPRC5CQ9NQ84 441 aa26.66■■□□□ 1.86
ATPAF1-213ENST00000574428 ODF2LQ9ULJ1 636 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms