RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 AKR1B10O60218 316 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 HIP1RO75146 1068 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 NOL4O94818 638 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 EPB41P11171 864 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 DSG3P32926 999 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 COG2Q14746 738 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 CCDC43Q96MW1 224 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 EDEM3Q9BZQ6 932 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 LACRTQ9GZZ8 138 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 TBC1D22BQ9NU19 505 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 CEP72Q9P209 647 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 EFCAB8A8MWE9 144 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 KRT86O43790 486 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 ATP9AO75110 1047 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 KIF11P52732 1056 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 ZNF131P52739 623 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 PLS1Q14651 629 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 FBXO38Q6PIJ6 1188 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 CDC23Q9UJX2 597 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 ZNF263O14978 683 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 TEX35Q5T0J7 233 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 STXBP4Q6ZWJ1 553 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
USP43-205ENST00000574408 PPP2R3BQ9Y5P8 575 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 SSC5DA1L4H1 1573 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
USP43-205ENST00000574408 AFPP02771 609 aaKnown RBP11.49□□□□□ -0.57
USP43-205ENST00000574408 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 HS2ST1Q7LGA3 356 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 DAW1Q8N136 415 aa11.49□□□□□ -0.57
USP43-205ENST00000574408 USO1O60763 962 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 NR3C2P08235 984 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 VAV2P52735 878 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 MAPK7Q13164 816 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 IFIH1Q9BYX4 1025 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 TMEM150BA6NC51 233 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 TFRCP02786 760 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 CCND2P30279 289 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 RARRES1P49788 294 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 KIF5AQ12840 1032 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 RAPGEF1Q13905 1077 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 UGCGQ16739 394 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 SFMBT2Q5VUG0 894 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 DUSP10Q9Y6W6 482 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 K7ENM7 598 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 CCNE2O96020 404 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 ACTN1P12814 892 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 CYP2J2P51589 502 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 OAZ1P54368 228 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 ARID5AQ03989 594 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 UTP14CQ5TAP6 766 aaKnown RBP11.48□□□□□ -0.57
USP43-205ENST00000574408 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP43-205ENST00000574408 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 AFG3L2Q9Y4W6 797 aa11.48□□□□□ -0.57
USP43-205ENST00000574408 UBE4BO95155 1302 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 WDR64B1ANS9 1081 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 SLC9A1P19634 815 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 ENOX2Q16206 610 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 EXOC3L4Q17RC7 722 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 VSIG10LQ86VR7 867 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 SYCP3Q8IZU3 236 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 NUCKS1Q9H1E3 243 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 EPC1Q9H2F5 836 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 PHIPQ8WWQ0 1821 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 ENC1O14682 589 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 TLR2O60603 784 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 KRT76Q01546 638 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 VGLL4Q14135 290 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms