RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 SARSP49591 514 aaKnown RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 ZP2Q05996 745 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 CLUL1Q15846 466 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 ZNF484Q5JVG2 852 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 ABHD15Q6UXT9 468 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 REXO1Q8N1G1 1221 aaKnown RBP13.84□□□□□ -0.19
CCDC40-210ENST00000573903 ZNF577Q9BSK1 485 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 C1orf112Q9NSG2 853 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
CCDC40-210ENST00000573903 IGKV6D-21A0A0A0MT36 114 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 GPR182O15218 404 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 MBTPS2O43462 519 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 CCNE2O96020 404 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 GNA11P29992 359 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 CDC27P30260 824 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 SMAD4Q13485 552 aaKnown RBP13.83□□□□□ -0.2
CCDC40-210ENST00000573903 CTC1Q2NKJ3 1217 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 RTN4RL1Q86UN2 441 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-210ENST00000573903 SMAP1Q8IYB5 467 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-210ENST00000573903 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 POF1BQ8WVV4 589 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 CD207Q9UJ71 328 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 EVPLQ92817 2033 aa13.83□□□□□ -0.2
CCDC40-210ENST00000573903 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 TBX10O75333 385 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 ITGB1P05556 798 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 PSAPP07602 524 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 CYP3A4P08684 503 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 LTBRP36941 435 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 SMAD2Q15796 467 aaKnown RBP13.82□□□□□ -0.2
CCDC40-210ENST00000573903 ZNF746Q6NUN9 644 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-210ENST00000573903 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 METTL13Q8N6R0 699 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 BICD2Q8TD16 824 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-210ENST00000573903 ADAM2Q99965 735 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
CCDC40-210ENST00000573903 SAMM50Q9Y512 469 aa13.82□□□□□ -0.2
CCDC40-210ENST00000573903 FNDC1Q4ZHG4 1894 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 PLXNA4Q9HCM2 1894 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 MYO7AQ13402 2215 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 IGLV3-22A0A075B6J6 115 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 GATMP50440 423 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 UBE3AQ05086 875 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 DLX2Q07687 328 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 APOBRQ0VD83 1088 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 Q6ZUG5 572 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 SLC24A5Q71RS6 500 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 CRIPAKQ8N1N5 446 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 BRF1Q92994 677 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 FAM167AQ96KS9 214 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 JAKMIP1Q96N16 626 aaKnown RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 TMX1Q9H3N1 280 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 RGS18Q9NS28 235 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 FAM217BQ9NTX9 383 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-210ENST00000573903 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
CCDC40-210ENST00000573903 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 MAGEB2O15479 319 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 LINC01565O15544 149 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 DHX15O43143 795 aaKnown RBP13.8□□□□□ -0.2
CCDC40-210ENST00000573903 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 TMOD1P28289 359 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC40-210ENST00000573903 IRS1P35568 1242 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 NRIP1P48552 1158 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 CRYBB1P53674 252 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-210ENST00000573903 ADAM15Q13444 863 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 CAMK1Q14012 370 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 PRR16Q569H4 304 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 THNSL1Q8IYQ7 743 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 EFHBQ8N7U6 833 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 OSMRQ99650 979 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 ATP6V0A4Q9HBG4 840 aa13.8□□□□□ -0.2
CCDC40-210ENST00000573903 PCDHA10Q9Y5I2 948 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms