RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 FAM178BQ8IXR5 827 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 SMAP1Q8IYB5 467 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 CMTR2Q8IYT2 770 aaKnown RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 CCDC148Q8NFR7 591 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 LENG9Q96B70 501 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 PLVAPQ9BX97 442 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 EPHX3Q9H6B9 360 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 RAPGEFL1Q9UHV5 662 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
TVP23A-208ENST00000573857 MAFBQ9Y5Q3 323 aaPredicted RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 MRPL42Q9Y6G3 142 aaKnown RBP16.22■□□□□ 0.19
TVP23A-208ENST00000573857 GRXCR2A6NFK2 248 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 C22orf31O95567 290 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 MMP1P03956 469 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 IL9P15248 144 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 PDIA3P30101 505 aaKnown RBP16.21■□□□□ 0.19
TVP23A-208ENST00000573857 PUS10Q3MIT2 529 aaKnown RBP16.21■□□□□ 0.19
TVP23A-208ENST00000573857 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-208ENST00000573857 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 TMEM40Q8WWA1 233 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-208ENST00000573857 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 NCOA5Q9HCD5 579 aaKnown RBP16.21■□□□□ 0.19
TVP23A-208ENST00000573857 ERVK-5Q9HDB9 667 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 PCDHA10Q9Y5I2 948 aa16.21■□□□□ 0.19
TVP23A-208ENST00000573857 NCK2O43639 380 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 MGEA5O60502 916 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 PSAPP07602 524 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
TVP23A-208ENST00000573857 PAN2Q504Q3 1202 aaKnown RBP16.2■□□□□ 0.18
TVP23A-208ENST00000573857 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
TVP23A-208ENST00000573857 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
TVP23A-208ENST00000573857 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
TVP23A-208ENST00000573857 GATMP50440 423 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
TVP23A-208ENST00000573857 HYAL1Q12794 435 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
TVP23A-208ENST00000573857 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 CTC1Q2NKJ3 1217 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 GJD3Q8N144 294 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 P2RX5Q93086 422 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
TVP23A-208ENST00000573857 SH3GLB2Q9NR46 395 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 ST3GAL5Q9UNP4 418 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
TVP23A-208ENST00000573857 DENND3A2RUS2 1198 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 WDR64B1ANS9 1081 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 GPR182O15218 404 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 MSH4O15457 936 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
TVP23A-208ENST00000573857 EDIL3O43854 480 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 CSPG5O95196 566 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 VTNP04004 478 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 ITGB1P05556 798 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 LTBRP36941 435 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
TVP23A-208ENST00000573857 CAMK1Q14012 370 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 ODR4Q5SWX8 454 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 TRMT1LQ7Z2T5 733 aaKnown RBP16.18■□□□□ 0.18
TVP23A-208ENST00000573857 METTL13Q8N6R0 699 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 OSMRQ99650 979 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 ADAM2Q99965 735 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 RGS18Q9NS28 235 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 FAM50BQ9Y247 325 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 PCDHB7Q9Y5E2 793 aa16.18■□□□□ 0.18
TVP23A-208ENST00000573857 PI4K2BG5E9Z4 385 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 GPR32O75388 356 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 IBSPP21815 317 aaPredicted RBP16.17■□□□□ 0.18
TVP23A-208ENST00000573857 DNAJB1P25685 340 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
TVP23A-208ENST00000573857 USP11P51784 963 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 NLRP5P59047 1200 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 TMEM31Q5JXX7 168 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 SLC24A5Q71RS6 500 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 SPPL3Q8TCT6 385 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 RIT2Q99578 217 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 LRFN3Q9BTN0 628 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 DISC1Q9NRI5 854 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
TVP23A-208ENST00000573857 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms