RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 FUT2Q10981 343 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 AP3B2Q13367 1082 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 CBX2Q14781 532 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 SLC24A5Q71RS6 500 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 MICAL1Q8TDZ2 1067 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 ADAM2Q99965 735 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 GLT8D2Q9H1C3 349 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 GINS2Q9Y248 185 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 USP15Q9Y4E8 981 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 PCDHGC5Q9Y5F6 944 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 CNTNAP5Q8WYK1 1306 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 COL1A2P08123 1366 aa11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 BAZ2BQ9UIF8 2168 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-205ENST00000572656 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 TMEM221A6NGB7 291 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 TBKBP1A7MCY6 615 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 C9IYK1 514 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 M0R296 226 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 DDX39AO00148 427 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 GPR182O15218 404 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZNF76P36508 570 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZXDAP98168 799 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 PKN1Q16512 942 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 SPOUT1Q5T280 376 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 PBXIP1Q96AQ6 731 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 CDCA3Q99618 268 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 PHF7Q9BWX1 381 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ANO2Q9NQ90 1003 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZNF302Q9NR11 478 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 TMEM260Q9NX78 707 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZBTB42B2RXF5 422 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 FAM86B1E9PN63 330 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 PER2O15055 1255 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 DHX15O43143 795 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 ZBTB43O43298 467 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 FGF18O76093 207 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 FAM86B2P0C5J1 330 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 ATF7P17544 494 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 CRYBB1P53674 252 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 FAM189BP81408 668 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 RTN1Q16799 776 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 DUSP6Q16828 381 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 RNF20Q5VTR2 975 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 SUSD6Q92537 303 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 NEK1Q96PY6 1258 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 ELAC1Q9H777 363 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 TYW1Q9NV66 732 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
TRAPPC1-205ENST00000572656 TTC3P53804 2025 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 NLRC5Q86WI3 1866 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 IPO5O00410 1097 aaKnown RBP11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 FSCN2O14926 492 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 GPR32O75388 356 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 C22orf31O95567 290 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 CYP3A4P08684 503 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 LAG3P18627 525 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 ATP4AP20648 1035 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 ERVFC1P60507 584 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 RBM10P98175 930 aaKnown RBP11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 DSC3Q14574 896 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 KIZQ2M2Z5 673 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 DHX32Q7L7V1 743 aaKnown RBP11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 RPGRIP1Q96KN7 1286 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 OSMRQ99650 979 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 PRRX2Q99811 253 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 CWH43Q9H720 699 aa11.21□□□□□ -0.61
TRAPPC1-205ENST00000572656 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms