RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 SPPL3Q8TCT6 385 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 CRYGNQ8WXF5 182 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 BBXQ8WY36 941 aaPredicted RBP17.66■□□□□ 0.42
TSR1-202ENST00000571806 ZBTB10Q96DT7 871 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 KCNH6Q9H252 994 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 CD207Q9UJ71 328 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 CEP131Q9UPN4 1083 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 PCDHB12Q9Y5F1 795 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 DENND3A2RUS2 1198 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 FAM86B1E9PN63 330 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 CCNE2O96020 404 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 ITGB1P05556 798 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 FAM86B2P0C5J1 330 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 METAP2P50579 478 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSR1-202ENST00000571806 CRYBB1P53674 252 aaPredicted RBP17.65■□□□□ 0.42
TSR1-202ENST00000571806 CAMK1Q14012 370 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 SWSAP1Q6NVH7 229 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 SLC24A5Q71RS6 500 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 CENPQQ7L2Z9 268 aaPredicted RBP17.65■□□□□ 0.42
TSR1-202ENST00000571806 KIAA0319LQ8IZA0 1049 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 EFHBQ8N7U6 833 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 ZNF577Q9BSK1 485 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 ZMYND12Q9H0C1 365 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 TMX1Q9H3N1 280 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 IGFLR1Q9H665 355 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 FAM217BQ9NTX9 383 aaPredicted RBP17.65■□□□□ 0.42
TSR1-202ENST00000571806 TMEM260Q9NX78 707 aa17.65■□□□□ 0.42
TSR1-202ENST00000571806 ATG2AQ2TAZ0 1938 aa17.64■□□□□ 0.42
TSR1-202ENST00000571806 LOXHD1Q8IVV2 1947 aa17.64■□□□□ 0.42
TSR1-202ENST00000571806 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 DDX39AO00148 427 aaKnown RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 EYA4O95677 639 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 CDC27P30260 824 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 NDUFV1P49821 464 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 DLX2Q07687 328 aaPredicted RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 ADCK5Q3MIX3 580 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 PDE12Q6L8Q7 609 aaKnown RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 CCDC60Q8IWA6 550 aaPredicted RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 CKAP2LQ8IYA6 745 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 REXO1Q8N1G1 1221 aaKnown RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 BICD2Q8TD16 824 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 POF1BQ8WVV4 589 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 ERVK-5Q9HDB9 667 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 GINS2Q9Y248 185 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 PCDHA10Q9Y5I2 948 aa17.64■□□□□ 0.41
TSR1-202ENST00000571806 MAFBQ9Y5Q3 323 aaPredicted RBP17.64■□□□□ 0.41
TSR1-202ENST00000571806 MAGEB2O15479 319 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 TBX10O75333 385 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 CDC45O75419 566 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 PSAPP07602 524 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 IRS1P35568 1242 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 COASYQ13057 564 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 JAKMIP3Q5VZ66 844 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 FBXL16Q8N461 479 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 MSLNLQ96KJ4 702 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 FAM167AQ96KS9 214 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 ADAM2Q99965 735 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
TSR1-202ENST00000571806 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
TSR1-202ENST00000571806 ST3GAL5Q9UNP4 418 aa17.63■□□□□ 0.41
TSR1-202ENST00000571806 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
TSR1-202ENST00000571806 PRPF3O43395 683 aaKnown RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 DNAJB1P25685 340 aa17.62■□□□□ 0.41
TSR1-202ENST00000571806 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
TSR1-202ENST00000571806 CDCA3Q99618 268 aaPredicted RBP17.62■□□□□ 0.41
TSR1-202ENST00000571806 TMEM161AQ9NX61 479 aa17.62■□□□□ 0.41
TSR1-202ENST00000571806 KIAA1671Q9BY89 1806 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 ZBTB42B2RXF5 422 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 C9IYK1 514 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 HOXA2O43364 376 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 C22orf31O95567 290 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 TMOD1P28289 359 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 CIITAP33076 1130 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 GTF2F1P35269 517 aaKnown RBP eCLIP17.61■□□□□ 0.41
TSR1-202ENST00000571806 FAM189BP81408 668 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 CLUL1Q15846 466 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 METTL13Q8N6R0 699 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 CCDC148Q8NFR7 591 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 MICAL1Q8TDZ2 1067 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 TMEM40Q8WWA1 233 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 TLE6Q9H808 572 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 NID2Q14112 1375 aa17.61■□□□□ 0.41
TSR1-202ENST00000571806 TBKBP1A7MCY6 615 aa17.6■□□□□ 0.41
TSR1-202ENST00000571806 LINC01565O15544 149 aa17.6■□□□□ 0.41
TSR1-202ENST00000571806 GPR32O75388 356 aa17.6■□□□□ 0.41
TSR1-202ENST00000571806 ATP4AP20648 1035 aa17.6■□□□□ 0.41
TSR1-202ENST00000571806 NRIP1P48552 1158 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms