RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 BMP8AQ7Z5Y6 402 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 USP15Q9Y4E8 981 aaPredicted RBP16.32■□□□□ 0.2
CIITA-205ENST00000571186 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 TBKBP1A7MCY6 615 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 LIFRP42702 1097 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 ZXDAP98168 799 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 IER5LQ5T953 404 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 SUGP1Q8IWZ8 645 aaKnown RBP16.31■□□□□ 0.2
CIITA-205ENST00000571186 KCNB2Q92953 911 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 ADAM2Q99965 735 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 CDHR5Q9HBB8 845 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 AAASQ9NRG9 546 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
CIITA-205ENST00000571186 DENND3A2RUS2 1198 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 BACH1O14867 736 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 MGEA5O60502 916 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 RPS6KA5O75582 802 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 REC8O95072 547 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
CIITA-205ENST00000571186 FAM102BQ5T8I3 360 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
CIITA-205ENST00000571186 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
CIITA-205ENST00000571186 ERVK-5Q9HDB9 667 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
CIITA-205ENST00000571186 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
CIITA-205ENST00000571186 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
CIITA-205ENST00000571186 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 HBP1O60381 514 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 FGF18O76093 207 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 ATG7O95352 703 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 FOSP01100 380 aaPredicted RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 ZNF76P36508 570 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 SLC26A2P50443 739 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 NAPAP54920 295 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 ERVFC1P60507 584 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 UBE3AQ05086 875 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 CBX2Q14781 532 aaPredicted RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 PKN1Q16512 942 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 ODR4Q5SWX8 454 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 MICU3Q86XE3 530 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 THNSL1Q8IYQ7 743 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 PRSS33Q8NF86 280 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 JAKMIP1Q96N16 626 aaKnown RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 TYW1Q9NV66 732 aaKnown RBP16.29■□□□□ 0.2
CIITA-205ENST00000571186 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 ST3GAL5Q9UNP4 418 aa16.29■□□□□ 0.2
CIITA-205ENST00000571186 CACNA1HO95180 2353 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 USP34Q70CQ2 3546 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 GPR182O15218 404 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 PTPN5P54829 565 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 KRT32Q14532 448 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 SLC24A5Q71RS6 500 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
CIITA-205ENST00000571186 FBXL6Q8N531 539 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 PPP1R16BQ96T49 567 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 PRRX2Q99811 253 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 C1orf112Q9NSG2 853 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 KMT2EQ8IZD2 1858 aa16.28■□□□□ 0.2
CIITA-205ENST00000571186 ZFHX2Q9C0A1 2572 aaPredicted RBP16.27■□□□□ 0.2
CIITA-205ENST00000571186 C9IYK1 514 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 MEIS1O00470 390 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 ADCY7P51828 1080 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 DUSP6Q16828 381 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 ZNF484Q5JVG2 852 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
CIITA-205ENST00000571186 PDXDC2PQ6P474 469 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 COLGALT1Q8NBJ5 622 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 ATP8B4Q8TF62 1192 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 CDCA3Q99618 268 aaPredicted RBP16.27■□□□□ 0.2
CIITA-205ENST00000571186 ATP6V0A4Q9HBG4 840 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 HCSTQ9UBK5 93 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 BRPF3Q9ULD4 1205 aa16.27■□□□□ 0.2
CIITA-205ENST00000571186 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.2
CIITA-205ENST00000571186 CFAP54Q96N23 3096 aa16.27■□□□□ 0.19
CIITA-205ENST00000571186 IGKV6D-21A0A0A0MT36 114 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 FSD2A1L4K1 749 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
CIITA-205ENST00000571186 CCNE2O96020 404 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms