RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	DEF6	Q9H4E7	631 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	KCNH7	Q9NS40	1196 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	SAMD15	Q9P1V8	674 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	B3GALT1	Q9Y5Z6	326 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ZNF623	O75123	536 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	STAT3	P40763	770 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	ETV4	P43268	484 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	HERVK_113	P62684	666 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	MOGS	Q13724	837 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	PCOLCE	Q15113	449 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	SPDYA	Q5MJ70	313 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	KANK2	Q63ZY3	851 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	DPP8	Q6V1X1	898 aa	Predicted RBP	4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	OR14K1	Q8NGZ2	314 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	MRFAP1L1	Q96HT8	127 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	WNK4	Q96J92	1243 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	C1QTNF3	Q9BXJ4	246 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	OR10A5	Q9H207	317 aa		4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	ZFR2	Q9UPR6	939 aa	Known RBP	4.57	□□□□□ -1.68
BBS4-215	ENST00000569001	PLD2	O14939	933 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	KCNQ2	O43526	872 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	OPA1	O60313	960 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	CDC14B	O60729	498 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	ASMTL	O95671	621 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	MECP2	P51608	486 aa	Known RBP	4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	KIF11	P52732	1056 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	STIL	Q15468	1287 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	FUK	Q8N0W3	1084 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	BTBD2	Q9BX70	525 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	C12orf65	Q9H3J6	166 aa	Known RBP	4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	TMPRSS5	Q9H3S3	457 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	FAM184B	Q9ULE4	1060 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	MYRF	Q9Y2G1	1151 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	NR2E1	Q9Y466	385 aa		4.56	□□□□□ -1.68
BBS4-215	ENST00000569001	PTPDC1	A2A3K4	754 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	GOLGA6L22	H0YM25	854 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	TRAF5	O00463	557 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	CUTA	O60888	179 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	HIP1R	O75146	1068 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	RGS3	P49796	1198 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	MRE11	P49959	708 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	RAC3	P60763	192 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	R3HDM1	Q15032	1099 aa	Known RBP	4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	NFE2L2	Q16236	605 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	ZNF568	Q3ZCX4	644 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	PIK3R6	Q5UE93	754 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	WDR48	Q8TAF3	677 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	CFHR4	Q92496	578 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	OR14A2	Q96R54	314 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	BOC	Q9BWV1	1114 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	SEC61A2	Q9H9S3	476 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	OAZ3	Q9UMX2	235 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	TSC22D4	Q9Y3Q8	395 aa		4.55	□□□□□ -1.68
BBS4-215	ENST00000569001	CCDC163	A0A0D9SF12	145 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001		A0A0G2JNJ9	132 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	ARHGAP6	O43182	974 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	APP	P05067	770 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	JMJD7	P0C870	316 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	CR2	P20023	1033 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	PTX3	P26022	381 aa	Predicted RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	IGFALS	P35858	605 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	SELENOP	P49908	381 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	ZXDA	P98168	799 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	SLC6A3	Q01959	620 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	ADAM15	Q13444	863 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	EIF4H	Q15056	248 aa	Known RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	AGBL4	Q5VU57	503 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	GRAMD4	Q6IC98	578 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	OTOP1	Q7RTM1	612 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	DDX53	Q86TM3	631 aa	Known RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	RTKN2	Q8IZC4	609 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	BCL6B	Q8N143	479 aa	Predicted RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	CHST14	Q8NCH0	376 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	TMEM176A	Q96HP8	235 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	ADO	Q96SZ5	270 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	PLA2G12B	Q9BX93	195 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.54	□□□□□ -1.68
BBS4-215	ENST00000569001		Q9UFV3	132 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	TCAF1	Q9Y4C2	921 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	CD2AP	Q9Y5K6	639 aa		4.54	□□□□□ -1.68
BBS4-215	ENST00000569001	C1QTNF3-AMACR	E9PGA6	284 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	MUSK	O15146	869 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	FSHB	P01225	129 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	AMH	P03971	560 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	SLC9A1	P19634	815 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	SDHA	P31040	664 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	ANTXR2	P58335	489 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	ALDH6A1	Q02252	535 aa	Known RBP	4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	DUSP8	Q13202	625 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	TKFC	Q3LXA3	575 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	ZMAT1	Q5H9K5	638 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	TMEM200B	Q69YZ2	307 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	TRIM68	Q6AZZ1	485 aa		4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	CXXC5	Q7LFL8	322 aa	Known RBP	4.53	□□□□□ -1.68
BBS4-215	ENST00000569001	GPR135	Q8IZ08	494 aa		4.53	□□□□□ -1.68

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