RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PARP2Q9UGN5 583 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 KRT5P13647 590 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 CCND1P24385 295 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 USP11P51784 963 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 GALCP54803 685 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 IL9RQ01113 521 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 AGBL2Q5U5Z8 902 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 ERP27Q96DN0 273 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 OSGEPQ9NPF4 335 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 BZW2Q9Y6E2 419 aaKnown RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 A0A1W2PQJ5 194 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 SLC8A3P57103 927 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 MECOMQ03112 1051 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 SPRED3Q2MJR0 410 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 LRRC23Q53EV4 343 aaPredicted RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 MEI1Q5TIA1 1274 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 ADGRA1Q86SQ6 560 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 C1orf54Q8WWF1 131 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 RUBCNQ92622 972 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 NEURL4Q96JN8 1562 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 LRRC37BQ96QE4 947 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 PASKQ96RG2 1323 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 HEMGNQ9BXL5 484 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 KDM4CQ9H3R0 1056 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 PXDNQ92626 1479 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 LAD1O00515 517 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 PLA2G4BP0C869 781 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 CA4P22748 312 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.52
PALB2-206ENST00000568219 MTM1Q13496 603 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 USH1GQ495M9 461 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.52
PALB2-206ENST00000568219 BARGINQ6ZT62 677 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 BZW1Q7L1Q6 419 aaKnown RBP11.77□□□□□ -0.52
PALB2-206ENST00000568219 TPH2Q8IWU9 490 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 GBP7Q8N8V2 638 aaPredicted RBP11.77□□□□□ -0.52
PALB2-206ENST00000568219 PPP1R14CQ8TAE6 165 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 TEKT4Q8WW24 435 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 FAM118BQ9BPY3 351 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 A0A0G2JND7 137 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 RASA4BC9J798 803 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 F8VZ95 297 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 STXBP3O00186 592 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 RASA4O43374 803 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 COPS2P61201 443 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 RCN2Q14257 317 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 SEC23AQ15436 765 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 MIIPQ5JXC2 388 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 KAZNQ674X7 775 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 SMC6Q96SB8 1091 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.52
PALB2-206ENST00000568219 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.52
PALB2-206ENST00000568219 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
PALB2-206ENST00000568219 POTECB2RU33 542 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 ADAMTS3O15072 1205 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 GAS8O95995 478 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 UCHL3P15374 230 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 KYNUQ16719 465 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 SGO2Q562F6 1265 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 ARHGEF18Q6ZSZ5 1173 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 RUNDC3BQ96NL0 473 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 NEUROG2Q9H2A3 272 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 PAPOLBQ9NRJ5 636 aaKnown RBP11.77□□□□□ -0.53
PALB2-206ENST00000568219 METTL5Q9NRN9 209 aaKnown RBP11.77□□□□□ -0.53
PALB2-206ENST00000568219 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 HAO1Q9UJM8 370 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 PFDN1O60925 122 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 ANKRD20A2Q5SQ80 823 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 ANKRD20A1Q5TYW2 823 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 TMC3Q7Z5M5 1100 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 C18orf8Q96DM3 657 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 NAF1Q96HR8 494 aaKnown RBP11.77□□□□□ -0.53
PALB2-206ENST00000568219 ERP44Q9BS26 406 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 SLITRK6Q9H5Y7 841 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 NAGPAQ9UK23 515 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 ZNF652Q9Y2D9 606 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
PALB2-206ENST00000568219 FOXO6A8MYZ6 492 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 ECEL1O95672 775 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 LDHCP07864 332 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 C9orf72Q96LT7 481 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms