RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 SEPT8Q92599 483 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 PBX4Q9BYU1 374 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-212ENST00000565517 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
COMMD4-212ENST00000565517 KDM3AQ9Y4C1 1321 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 CDY2AQ9Y6F7 541 aa17.34■□□□□ 0.37
COMMD4-212ENST00000565517 GRXCR1A8MXD5 290 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 KIF28PB7ZC32 967 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 STBD1O95210 358 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 MCM7P33993 719 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 TARBP2Q15633 366 aaKnown RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 TCTN1Q2MV58 587 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 FBXO47Q5MNV8 452 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 FAM43BQ6ZT52 329 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 ZNF710Q8N1W2 664 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-212ENST00000565517 MTMR10Q9NXD2 777 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 PCDHA11Q9Y5I1 949 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 TRPV2Q9Y5S1 764 aa17.33■□□□□ 0.36
COMMD4-212ENST00000565517 ATP2B1P20020 1258 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 TMOD1P28289 359 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 LPIN1Q14693 890 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 Q7L0L9 218 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 LINC01465Q8N7H1 131 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 BANK1Q8NDB2 785 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 TIFAQ96CG3 184 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
COMMD4-212ENST00000565517 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
COMMD4-212ENST00000565517 PBX2P40425 430 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 TXKP42681 527 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 HERC6Q8IVU3 1022 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-212ENST00000565517 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
COMMD4-212ENST00000565517 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 H3BQV1 296 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 GHRP10912 638 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 TBC1D8BQ0IIM8 1120 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 TMEM62Q0P6H9 643 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 ZNF174Q15697 407 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
COMMD4-212ENST00000565517 ANO5Q75V66 913 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
COMMD4-212ENST00000565517 HSD17B14Q9BPX1 270 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 LXNQ9BS40 222 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-212ENST00000565517 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 RGL1Q9NZL6 768 aa17.3■□□□□ 0.36
COMMD4-212ENST00000565517 ARID2Q68CP9 1835 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 IGKV6-21A0A0C4DH24 114 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 SLITRK3O94933 977 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 LYPLA2O95372 231 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 AMHP03971 560 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 RABGGTBP53611 331 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 DEFB103AP81534 67 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 MTERF2Q49AM1 385 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 EXOC8Q8IYI6 725 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 SNX21Q969T3 373 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 DYDC2Q96IM9 177 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 EIF2AK1Q9BQI3 630 aaKnown RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 ZNF576Q9H609 170 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 WRAP73Q9P2S5 460 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 YBX2Q9Y2T7 364 aaKnown RBP17.29■□□□□ 0.36
COMMD4-212ENST00000565517 MYO9BQ13459 2157 aa17.29■□□□□ 0.36
COMMD4-212ENST00000565517 TTC3P53804 2025 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-212ENST00000565517 GPR32O75388 356 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 MAFO75444 373 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-212ENST00000565517 GJB5O95377 273 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 PDCP20941 246 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 CLCN3P51790 818 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 CRYBB1P53674 252 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-212ENST00000565517 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
COMMD4-212ENST00000565517 FTHL17Q9BXU8 183 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 SLC28A3Q9HAS3 691 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms