RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 TMEM40Q8WWA1 233 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 BARX2Q9UMQ3 279 aaPredicted RBP13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 COL1A2P08123 1366 aa13.2□□□□□ -0.3
NSMCE1-209ENST00000565384 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 PLXNA4Q9HCM2 1894 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 hCG_1984214I3L0E3 225 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 ZBTB43O43298 467 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 GLP2RO95838 553 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 ZNF76P36508 570 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 MRE11P49959 708 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 CCDC60Q8IWA6 550 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 KIAA0319LQ8IZA0 1049 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 ZNF713Q8N859 430 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 ZNF302Q9NR11 478 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 NOC2LQ9Y3T9 749 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-209ENST00000565384 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 UBE3AQ05086 875 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 PDXDC2PQ6P474 469 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 MICAL1Q8TDZ2 1067 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 EDAQ92838 391 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 PPP1R16BQ96T49 567 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 ADAM2Q99965 735 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 TLE6Q9H808 572 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 AAASQ9NRG9 546 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 RGS18Q9NS28 235 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 ST3GAL5Q9UNP4 418 aa13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-209ENST00000565384 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 ZBTB42B2RXF5 422 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 LOC730098B7Z3J9 87 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 C9IYK1 514 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 PER2O15055 1255 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 GPR182O15218 404 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 FGF18O76093 207 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 ATP4AP20648 1035 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 OSMRQ99650 979 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
NSMCE1-209ENST00000565384 FNDC1Q4ZHG4 1894 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 DHX15O43143 795 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 C22orf31O95567 290 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 FGFR1P11362 822 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 CDC27P30260 824 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 RBM10P98175 930 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 DUSP6Q16828 381 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 KIZQ2M2Z5 673 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM228AQ86W67 206 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 VN1R2Q8NFZ6 395 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 CDCA3Q99618 268 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 ATP6V0A4Q9HBG4 840 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
NSMCE1-209ENST00000565384 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms