RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 KDM7AQ6ZMT4 941 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 MAATS1Q7Z4T9 603 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 AMNQ9BXJ7 453 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 DDX47Q9H0S4 455 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 TYW1Q9NV66 732 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 GCNT4Q9P109 453 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 MSH4O15457 936 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 SART1O43290 800 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 FLOT1O75955 427 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 LIG3P49916 1009 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 NYAP2Q9P242 653 aa16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 GREB1LQ9C091 1923 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-205ENST00000564747 SPDYE3A6NKU9 549 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 EML1O00423 815 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 TBX3O15119 743 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 NR1D1P20393 614 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 HSPA9P38646 679 aaKnown RBP16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 CRKP46108 304 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 JAM2P57087 298 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 CEP85LQ5SZL2 805 aa16.89■□□□□ 0.3
GTF3C1-205ENST00000564747 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 F5H6K3 240 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 LSP1P33241 339 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 KLRC3Q07444 240 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 PEX26Q7Z412 305 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 PIGOQ8TEQ8 1089 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 ATP6V1G3Q96LB4 118 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 NEUROG2Q9H2A3 272 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 VAV3Q9UKW4 847 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 NENFQ9UMX5 172 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 FAM170AA1A519 330 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 A6NNZ2 444 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 PGRMC1O00264 195 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 GFPT2O94808 682 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 ITGA4P13612 1032 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 PPARDQ03181 441 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 TUBB8Q3ZCM7 444 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 OR2W6PQ8NHA6 318 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 FAM20AQ96MK3 541 aa16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 METTL14Q9HCE5 456 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-205ENST00000564747 G3V3G9 751 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 TGFB1I1O43294 461 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 ERLIN2O94905 339 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 CLSTN1O94985 981 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 GDF11O95390 407 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 SREBF1P36956 1147 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 HSD17B3P37058 310 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.293e-12■■□□□ 14.1
GTF3C1-205ENST00000564747 CENPHQ9H3R5 247 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 RABGAP1Q9Y3P9 1069 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 KRIT1O00522 736 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 ZBTB39O15060 712 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 TBCAO75347 108 aaKnown RBP16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 ICA1Q05084 483 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 UAP1Q16222 522 aaPredicted RBP16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 SH3BP5LQ7L8J4 393 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 DAAM2Q86T65 1068 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 AMACRQ9UHK6 382 aa16.88■□□□□ 0.29
GTF3C1-205ENST00000564747 OPLAHO14841 1288 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 FLT3P36888 993 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 ZC2HC1CQ53FD0 456 aaPredicted RBP16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 EMC10Q5UCC4 262 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 RINT1Q6NUQ1 792 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 SLFN11Q7Z7L1 901 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 BORCS6Q96GS4 357 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 FBXL5Q9UKA1 691 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 SLC16A3O15427 465 aaKnown RBP16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 NMT1P30419 496 aaKnown RBP16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 ZNF76P36508 570 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 SEC24CP53992 1094 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 ITGB3BPQ13352 177 aaPredicted RBP16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 CUL1Q13616 776 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 EPN3Q9H201 632 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 PI4KBQ9UBF8 816 aa16.87■□□□□ 0.29
GTF3C1-205ENST00000564747 FAM198AQ9UFP1 575 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms