RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZMAT1Q5H9K5 638 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 CATSPEREQ5SY80 951 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 OTOP2Q7RTS6 562 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 C2orf69Q8N8R5 385 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 HIPK4Q8NE63 616 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 CLUHP3Q96NS8 147 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 CDK5RAP1Q96SZ6 601 aaKnown RBP5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 DPYSL5Q9BPU6 564 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 OR10A5Q9H207 317 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 FBXO10Q9UK96 956 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZFR2Q9UPR6 939 aaKnown RBP5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 MATN2O00339 956 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 PLD2O14939 933 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 MUSKO15146 869 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZBTB48P10074 688 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 SDHAP31040 664 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 SQSTM1Q13501 440 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 SPDYAQ5MJ70 313 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 FUKQ8N0W3 1084 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 WDR48Q8TAF3 677 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 OAZ3Q9UMX2 235 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 NR2E1Q9Y466 385 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 ASB1Q9Y576 335 aa5.06□□□□□ -1.6
HMGB1P33-201ENST00000563485 A0A0G2JNJ9 132 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 ARHGAP6O43182 974 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 HIP1RO75146 1068 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 KRT37O76014 449 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 NPTXRO95502 500 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 CR2P20023 1033 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 MOGSQ13724 837 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 NFYCQ13952 458 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 PCOLCEQ15113 449 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 NFE2L2Q16236 605 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 AGBL4Q5VU57 503 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 TMEM200BQ69YZ2 307 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 FILIP1Q7Z7B0 1213 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 KANSL2Q9H9L4 492 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 Q9UFV3 132 aa5.05□□□□□ -1.6
HMGB1P33-201ENST00000563485 GOLGA6L22H0YM25 854 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 M0R2C6 588 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 CDC14BO60729 498 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 DNAJC8O75937 253 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 GLRX3O76003 335 aaKnown RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 MRE11P49959 708 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 MECP2P51608 486 aaKnown RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 STAT5BP51692 787 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 DUSP8Q13202 625 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZNF460Q14592 562 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 HS1BP3Q53T59 392 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 TRIM68Q6AZZ1 485 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZCCHC8Q6NZY4 707 aaKnown RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 OTOP1Q7RTM1 612 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 DDX53Q86TM3 631 aaKnown RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 CFHR4Q92496 578 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 FOXRED1Q96CU9 486 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 C12orf65Q9H3J6 166 aaKnown RBP5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 SAMD15Q9P1V8 674 aa5.04□□□□□ -1.6
HMGB1P33-201ENST00000563485 DVL2O14641 736 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 AKAP8O43823 692 aaKnown RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 RAD17O75943 681 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 C6P13671 934 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 TACR2P21452 398 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 IGFALSP35858 605 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 ALDH6A1Q02252 535 aaKnown RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 GRAMD4Q6IC98 578 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 CC2D1AQ6P1N0 951 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 CRIP3Q6Q6R5 217 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 USP30Q70CQ3 517 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 RTN4RL1Q86UN2 441 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 RTKN2Q8IZC4 609 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 Q8N1X5 172 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 CHST14Q8NCH0 376 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 OR14K1Q8NGZ2 314 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 CALML6Q8TD86 181 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 SH3TC2Q8TF17 1288 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 MRFAP1L1Q96HT8 127 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 OR14A2Q96R54 314 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 ADOQ96SZ5 270 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZNF747Q9BV97 191 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 PLA2G12BQ9BX93 195 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 PUF60Q9UHX1 559 aaKnown RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 TESMINQ9Y4I5 508 aa5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 TNPO3Q9Y5L0 923 aaKnown RBP5.03□□□□□ -1.6
HMGB1P33-201ENST00000563485 PPP1R12AO14974 1030 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 OPA1O60313 960 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 FSHBP01225 129 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 ASLP04424 464 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 APEX1P27695 318 aaKnown RBP5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 MEOX1P50221 254 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 BCL6BQ8N143 479 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 OR10A2Q9H208 303 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 VPS11Q9H270 941 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 ZSWIM4Q9H7M6 989 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 FAM184BQ9ULE4 1060 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms