RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PLVAPQ9BX97 442 aa23.81■■□□□ 1.4
CHD9-208ENST00000563410 C6orf50Q9HD87 102 aa23.81■■□□□ 1.4
CHD9-208ENST00000563410 ALG13Q9NP73 1137 aaKnown RBP23.81■■□□□ 1.4
CHD9-208ENST00000563410 CLDND1Q9NY35 253 aa23.81■■□□□ 1.4
CHD9-208ENST00000563410 MMP1P03956 469 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 RPS6KB1P23443 525 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 HYAL1Q12794 435 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 CTC1Q2NKJ3 1217 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 ZNF484Q5JVG2 852 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 MCTP2Q6DN12 878 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 EP400NLQ6ZTU2 488 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 TMEM40Q8WWA1 233 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 P2RX5Q93086 422 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 ERVK-5Q9HDB9 667 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 TBC1D22BQ9NU19 505 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 PLAGL2Q9UPG8 496 aa23.8■■□□□ 1.4
CHD9-208ENST00000563410 NOC2LQ9Y3T9 749 aaKnown RBP23.8■■□□□ 1.4
CHD9-208ENST00000563410 MAFBQ9Y5Q3 323 aaPredicted RBP23.8■■□□□ 1.4
CHD9-208ENST00000563410 MGEA5O60502 916 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 GPR37L1O60883 481 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 STAG3L1P0CL83 205 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 GATMP50440 423 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 SETQ01105 290 aaPredicted RBP23.79■■□□□ 1.4
CHD9-208ENST00000563410 PAN2Q504Q3 1202 aaKnown RBP23.79■■□□□ 1.4
CHD9-208ENST00000563410 TMEM31Q5JXX7 168 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 ZNF746Q6NUN9 644 aaPredicted RBP23.79■■□□□ 1.4
CHD9-208ENST00000563410 RASGRP4Q8TDF6 673 aa23.79■■□□□ 1.4
CHD9-208ENST00000563410 CCDC12Q8WUD4 166 aaPredicted RBP23.79■■□□□ 1.4
CHD9-208ENST00000563410 NCK2O43639 380 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 EDIL3O43854 480 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 PPFIA3O75145 1194 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 C22orf31O95567 290 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 ITGB1P05556 798 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 DNAJB1P25685 340 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 GNA11P29992 359 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 CIITAP33076 1130 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 NFX1Q12986 1120 aaKnown RBP23.78■■□□□ 1.4
CHD9-208ENST00000563410 LENG9Q96B70 501 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 GINS2Q9Y248 185 aa23.78■■□□□ 1.4
CHD9-208ENST00000563410 RPS6KA5O75582 802 aa23.77■■□□□ 1.4
CHD9-208ENST00000563410 GTF2F1P35269 517 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHD9-208ENST00000563410 SARSP49591 514 aaKnown RBP23.77■■□□□ 1.4
CHD9-208ENST00000563410 DLX2Q07687 328 aaPredicted RBP23.77■■□□□ 1.4
CHD9-208ENST00000563410 PRR16Q569H4 304 aa23.77■■□□□ 1.4
CHD9-208ENST00000563410 SPPL3Q8TCT6 385 aa23.77■■□□□ 1.4
CHD9-208ENST00000563410 BBXQ8WY36 941 aaPredicted RBP23.77■■□□□ 1.4
CHD9-208ENST00000563410 RNF26Q9BY78 433 aaPredicted RBP23.77■■□□□ 1.4
CHD9-208ENST00000563410 FAM86C2PA6NEL3 165 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 CSPG5O95196 566 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 IFNAR1P17181 557 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 SSTR3P32745 418 aaPredicted RBP23.76■■□□□ 1.39
CHD9-208ENST00000563410 NAALADL2Q58DX5 795 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 SMAP1Q8IYB5 467 aaPredicted RBP23.76■■□□□ 1.39
CHD9-208ENST00000563410 KLHL23Q8NBE8 558 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 ST3GAL5Q9UNP4 418 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 PCDHA10Q9Y5I2 948 aa23.76■■□□□ 1.39
CHD9-208ENST00000563410 PSAPP07602 524 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 PDIA3P30101 505 aaKnown RBP23.75■■□□□ 1.39
CHD9-208ENST00000563410 EVCP57679 992 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 KIZQ2M2Z5 673 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 FAM43BQ6ZT52 329 aaPredicted RBP23.75■■□□□ 1.39
CHD9-208ENST00000563410 CKAP2LQ8IYA6 745 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 PPP1R16BQ96T49 567 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 ADAM2Q99965 735 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 SLC26A6Q9BXS9 759 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 RGS18Q9NS28 235 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 VPS54Q9P1Q0 977 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 GABBR1Q9UBS5 961 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 LRFN2Q9ULH4 789 aa23.75■■□□□ 1.39
CHD9-208ENST00000563410 LINC01565O15544 149 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 TBX10O75333 385 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 GPR32O75388 356 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 IRS1P35568 1242 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
CHD9-208ENST00000563410 AKAP17AQ02040 695 aaKnown RBP23.74■■□□□ 1.39
CHD9-208ENST00000563410 ZP2Q05996 745 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 TRMT1LQ7Z2T5 733 aaKnown RBP23.74■■□□□ 1.39
CHD9-208ENST00000563410 FAM228AQ86W67 206 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 CCDC148Q8NFR7 591 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 BICD2Q8TD16 824 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 OSMRQ99650 979 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 IGFLR1Q9H665 355 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 NCOA5Q9HCD5 579 aaKnown RBP23.74■■□□□ 1.39
CHD9-208ENST00000563410 PCDHB7Q9Y5E2 793 aa23.74■■□□□ 1.39
CHD9-208ENST00000563410 C9IYK1 514 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 VTNP04004 478 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 IBSPP21815 317 aaPredicted RBP23.73■■□□□ 1.39
CHD9-208ENST00000563410 PSMA5P28066 241 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 PLA2G5P39877 138 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 CRYBB1P53674 252 aaPredicted RBP23.73■■□□□ 1.39
CHD9-208ENST00000563410 ADAM15Q13444 863 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 CLUL1Q15846 466 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 ADGRD2Q7Z7M1 963 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 LINC01465Q8N7H1 131 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 POF1BQ8WVV4 589 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 C1orf112Q9NSG2 853 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 PRKAG3Q9UGI9 489 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 FAM50BQ9Y247 325 aa23.73■■□□□ 1.39
CHD9-208ENST00000563410 DENND3A2RUS2 1198 aa23.72■■□□□ 1.39
CHD9-208ENST00000563410 C19orf67A6NJJ6 358 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms