RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 PTPRZ1P23471 2315 aaPredicted RBP9.58□□□□□ -0.88
CKLF-208ENST00000563092 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 PER2O15055 1255 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 FGF18O76093 207 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 CSPG5O95196 566 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 HOXB8P17481 243 aaPredicted RBP9.58□□□□□ -0.88
CKLF-208ENST00000563092 SARSP49591 514 aaKnown RBP9.58□□□□□ -0.88
CKLF-208ENST00000563092 FAM189BP81408 668 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 IMMTQ16891 758 aaKnown RBP9.58□□□□□ -0.88
CKLF-208ENST00000563092 ANKRD54Q6NXT1 300 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 ADGRD1Q6QNK2 874 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 HOMER1Q86YM7 354 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 UBALD2Q8IYN6 164 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 TMEM105Q8N8V8 129 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 ZBTB10Q96DT7 871 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
CKLF-208ENST00000563092 SMARCAD1Q9H4L7 1026 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 TRPV2Q9Y5S1 764 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 UBIAD1Q9Y5Z9 338 aa9.58□□□□□ -0.88
CKLF-208ENST00000563092 FAM186AA6NE01 2351 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 C9IYK1 514 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 MAFGO15525 162 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 MGEA5O60502 916 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 INSRRP14616 1297 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 PAN2Q504Q3 1202 aaKnown RBP9.57□□□□□ -0.88
CKLF-208ENST00000563092 USP17L6PQ6QN14 398 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 NLRX1Q86UT6 975 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 NME8Q8N427 588 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 CDHR1Q96JP9 859 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 CWH43Q9H720 699 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 SENP2Q9HC62 589 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 ERVK-5Q9HDB9 667 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 RGS18Q9NS28 235 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 SORCS3Q9UPU3 1222 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 PCDHB12Q9Y5F1 795 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 DMXL1Q9Y485 3027 aa9.57□□□□□ -0.88
CKLF-208ENST00000563092 SMIM35A0A1B0GVV1 85 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 BRD1O95696 1058 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 MARK3P27448 753 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 SMARCA1P28370 1054 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 SP4Q02446 784 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 PAK2Q13177 524 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 MTMR3Q13615 1198 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
CKLF-208ENST00000563092 PLPPR4Q7Z2D5 763 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 COLGALT1Q8NBJ5 622 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
CKLF-208ENST00000563092 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 MAP3K14Q99558 947 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 SPZ1Q9BXG8 430 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 IL25Q9H293 177 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 AAASQ9NRG9 546 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 TYW1Q9NV66 732 aaKnown RBP9.56□□□□□ -0.88
CKLF-208ENST00000563092 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
CKLF-208ENST00000563092 FNDC1Q4ZHG4 1894 aaPredicted RBP9.55□□□□□ -0.88
CKLF-208ENST00000563092 IGKV6D-21A0A0A0MT36 114 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 HIDE1A8MVS5 230 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 ATG7O95352 703 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 SRGAP2BP0DMP2 458 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 TECP42680 631 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 CLCN5P51795 746 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 KRT76Q01546 638 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 PLCB4Q15147 1175 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 FAM102BQ5T8I3 360 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 SLC24A5Q71RS6 500 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 PLEKHM2Q8IWE5 1019 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 SMC5Q8IY18 1101 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 MICAL1Q8TDZ2 1067 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 TMEM40Q8WWA1 233 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 MRPS27Q92552 414 aaKnown RBP9.55□□□□□ -0.88
CKLF-208ENST00000563092 GLG1Q92896 1179 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
CKLF-208ENST00000563092 ADAM7Q9H2U9 754 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 POMKQ9H5K3 350 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 ELAC1Q9H777 363 aaKnown RBP9.55□□□□□ -0.88
CKLF-208ENST00000563092 NGRNQ9NPE2 291 aaKnown RBP9.55□□□□□ -0.88
CKLF-208ENST00000563092 JADE2Q9NQC1 790 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 C1orf112Q9NSG2 853 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 TMEM260Q9NX78 707 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 NR2E1Q9Y466 385 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 PCDHB7Q9Y5E2 793 aa9.55□□□□□ -0.88
CKLF-208ENST00000563092 ZBTB42B2RXF5 422 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 C2CD4DB7Z1M9 353 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 HIP1O00291 1037 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 LAG3P18627 525 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 IGBP1P78318 339 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 FOXK1P85037 733 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 ITIH3Q06033 890 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 TMEM62Q0P6H9 643 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 MTMR1Q13613 665 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 DSC3Q14574 896 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 TMEM266Q2M3C6 531 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 MCTP2Q6DN12 878 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
CKLF-208ENST00000563092 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms