RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 NECAB2Q7Z6G3 386 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 JDP2Q8WYK2 163 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 MTMR8Q96EF0 704 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 HSPBP1Q9NZL4 362 aa8.58□□□□□ -1.04
SMG1-204ENST00000561940 PRAMEF25A6NGN4 478 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 PARNO95453 639 aaKnown RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 ZBTB48P10074 688 aaPredicted RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 LSSP48449 732 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 ATP13A4Q4VNC1 1196 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 TRMT10BQ6PF06 316 aaKnown RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 NOSTRINQ8IVI9 506 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 DTX3Q8N9I9 347 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 TXNDC5Q8NBS9 432 aaKnown RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 SMAD5Q99717 465 aaKnown RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 L2HGDHQ9H9P8 463 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 VTA1Q9NP79 307 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 ARHGAP20Q9P2F6 1191 aa8.57□□□□□ -1.04
SMG1-204ENST00000561940 ARID1BQ8NFD5 2236 aaPredicted RBP8.57□□□□□ -1.04
SMG1-204ENST00000561940 SLC12A8A0AV02 714 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 DVL2O14641 736 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 NOBOXO60393 691 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 PRKD3O94806 890 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
SMG1-204ENST00000561940 KPNA1P52294 538 aaPredicted RBP8.56□□□□□ -1.04
SMG1-204ENST00000561940 CTSWP56202 376 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 IRF9Q00978 393 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 ITKQ08881 620 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 DBPQ10586 325 aaPredicted RBP8.56□□□□□ -1.04
SMG1-204ENST00000561940 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 STPG3Q8N7X2 389 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 CNTD1Q8N815 330 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 ZCCHC14Q8WYQ9 949 aaKnown RBP8.56□□□□□ -1.04
SMG1-204ENST00000561940 BOCQ9BWV1 1114 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 PDGFDQ9GZP0 370 aaPredicted RBP8.56□□□□□ -1.04
SMG1-204ENST00000561940 ARHGAP28Q9P2N2 729 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 ZFP69BQ9UJL9 534 aa8.56□□□□□ -1.04
SMG1-204ENST00000561940 ZNF839A8K0R7 811 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 TGM5O43548 720 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 FBXO21O94952 628 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 C4BPAP04003 597 aaKnown RBP8.55□□□□□ -1.04
SMG1-204ENST00000561940 ZNF28P17035 718 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 GJA9P57773 515 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 LCE4AQ5TA78 99 aa8.55□□□□□ -1.04
SMG1-204ENST00000561940 TACO1Q9BSH4 297 aaKnown RBP8.55□□□□□ -1.04
SMG1-204ENST00000561940 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
SMG1-204ENST00000561940 ALDH1L1O75891 902 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 SLC9A1P19634 815 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 TMEM132BQ14DG7 1078 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 ARHGAP44Q17R89 818 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 LILRA6Q6PI73 481 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
SMG1-204ENST00000561940 MS4A5Q9H3V2 200 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 TRHDEQ9UKU6 1024 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
SMG1-204ENST00000561940 PRICKLE3O43900 615 aaPredicted RBP8.53□□□□□ -1.04
SMG1-204ENST00000561940 CYP7B1O75881 506 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 IL18BPO95998 194 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 MC4RP32245 332 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 GJA4P35212 333 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 IQSEC1Q6DN90 963 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 CLRN3Q8NCR9 226 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 IGDCC4Q8TDY8 1250 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 ZDHHC9Q9Y397 364 aa8.53□□□□□ -1.04
SMG1-204ENST00000561940 H7C1D1 291 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 MMEP08473 750 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 TTF1Q15361 905 aaPredicted RBP8.52□□□□□ -1.05
SMG1-204ENST00000561940 C11orf74Q86VG3 221 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 KIAA1958Q8N8K9 716 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 WRNIP1Q96S55 665 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 ELF4Q99607 663 aaPredicted RBP8.52□□□□□ -1.05
SMG1-204ENST00000561940 PUS7LQ9H0K6 701 aaKnown RBP8.52□□□□□ -1.05
SMG1-204ENST00000561940 TMEM168Q9H0V1 697 aa8.52□□□□□ -1.05
SMG1-204ENST00000561940 LCHNA4D1U4 455 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 MROH6A6NGR9 719 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 GABRDO14764 452 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 COL6A1P12109 1028 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 CNR2P34972 360 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 KIF11P52732 1056 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 OCRLQ01968 901 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 NFIXQ14938 502 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 SMAD2Q15796 467 aaKnown RBP8.51□□□□□ -1.05
SMG1-204ENST00000561940 DDB1Q16531 1140 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 BROXQ5VW32 411 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
SMG1-204ENST00000561940 UCKL1Q9NWZ5 548 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 FTSJ1Q9UET6 329 aa8.51□□□□□ -1.05
SMG1-204ENST00000561940 PTX3P26022 381 aaPredicted RBP8.5□□□□□ -1.05
SMG1-204ENST00000561940 UBXN11Q5T124 520 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 FRMD5Q7Z6J6 570 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 ERCC4Q92889 916 aaPredicted RBP8.5□□□□□ -1.05
SMG1-204ENST00000561940 LCORQ96JN0 433 aaPredicted RBP8.5□□□□□ -1.05
SMG1-204ENST00000561940 PCIF1Q9H4Z3 704 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms