RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ADGRE1Q14246 886 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 UGCGQ16739 394 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 TRMT1LQ7Z2T5 733 aaKnown RBP26.86■■□□□ 1.89
CDR2-202ENST00000561630 USP38Q8NB14 1042 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 SLC17A8Q8NDX2 589 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 GBF1Q92538 1859 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 CELF4Q9BZC1 486 aaKnown RBP26.86■■□□□ 1.89
CDR2-202ENST00000561630 SH2B1Q9NRF2 756 aaPredicted RBP26.86■■□□□ 1.89
CDR2-202ENST00000561630 NRBP2Q9NSY0 501 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 KDM3AQ9Y4C1 1321 aa26.86■■□□□ 1.89
CDR2-202ENST00000561630 BTBD18B2RXH4 712 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 OATP04181 439 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 PRKCEQ02156 737 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 RABEP1Q15276 862 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 FAM117BQ6P1L5 589 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 DIS3L2Q8IYB7 885 aaKnown RBP26.85■■□□□ 1.89
CDR2-202ENST00000561630 TOP1MTQ969P6 601 aa26.85■■□□□ 1.89
CDR2-202ENST00000561630 AGO3Q9H9G7 860 aaKnown RBP26.85■■□□□ 1.89
CDR2-202ENST00000561630 TBX3O15119 743 aa26.84■■□□□ 1.89
CDR2-202ENST00000561630 FOSBP53539 338 aa26.84■■□□□ 1.89
CDR2-202ENST00000561630 UPF2Q9HAU5 1272 aaKnown RBP26.84■■□□□ 1.89
CDR2-202ENST00000561630 VAV3Q9UKW4 847 aa26.84■■□□□ 1.89
CDR2-202ENST00000561630 INSL6Q9Y581 213 aa26.84■■□□□ 1.89
CDR2-202ENST00000561630 MAGEB2O15479 319 aa26.83■■□□□ 1.89
CDR2-202ENST00000561630 CD52P31358 61 aa26.83■■□□□ 1.89
CDR2-202ENST00000561630 HTRA4P83105 476 aaPredicted RBP26.83■■□□□ 1.89
CDR2-202ENST00000561630 PPP2R5CQ13362 524 aa26.83■■□□□ 1.89
CDR2-202ENST00000561630 HAS1Q92839 578 aa26.83■■□□□ 1.89
CDR2-202ENST00000561630 CERS4Q9HA82 394 aa26.83■■□□□ 1.89
CDR2-202ENST00000561630 METTL13Q8N6R0 699 aa26.82■■□□□ 1.88
CDR2-202ENST00000561630 PTPRSQ13332 1948 aa26.82■■□□□ 1.88
CDR2-202ENST00000561630 HMGN5P82970 282 aaKnown RBP26.81■■□□□ 1.88
CDR2-202ENST00000561630 POTEDQ86YR6 584 aa26.81■■□□□ 1.88
CDR2-202ENST00000561630 IL27Q8NEV9 243 aa26.81■■□□□ 1.88
CDR2-202ENST00000561630 ARNTL2Q8WYA1 636 aa26.81■■□□□ 1.88
CDR2-202ENST00000561630 PADI3Q9ULW8 664 aa26.81■■□□□ 1.88
CDR2-202ENST00000561630 LINC01553A4QN01 128 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 EPOPA6NHQ4 379 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 EML1O00423 815 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 ENPP3O14638 875 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 IGFBP4P22692 258 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 XKR3Q5GH77 459 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 SPRED2Q7Z698 418 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 LINC01465Q8N7H1 131 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 SP7Q8TDD2 431 aaPredicted RBP26.8■■□□□ 1.88
CDR2-202ENST00000561630 C8orf76Q96K31 380 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 FTHL17Q9BXU8 183 aa26.8■■□□□ 1.88
CDR2-202ENST00000561630 NIFKQ9BYG3 293 aaKnown RBP26.8■■□□□ 1.88
CDR2-202ENST00000561630 MICAL3Q7RTP6 2002 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 ST18O60284 1047 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 MARCH6O60337 910 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 UPP2O95045 317 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 STBD1O95210 358 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 PAK2Q13177 524 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 SAFBQ15424 915 aaKnown RBP eCLIP26.79■■□□□ 1.88
CDR2-202ENST00000561630 TARBP2Q15633 366 aaKnown RBP26.79■■□□□ 1.88
CDR2-202ENST00000561630 SLFN12Q8IYM2 578 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 CDHR5Q9HBB8 845 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 GINS2Q9Y248 185 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 SIP14410 1827 aa26.79■■□□□ 1.88
CDR2-202ENST00000561630 RFXAPO00287 272 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 BAG4O95429 457 aaKnown RBP26.78■■□□□ 1.88
CDR2-202ENST00000561630 TMOD1P28289 359 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 CLCN3P51790 818 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 PSMC5P62195 406 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 GUCY1B3Q02153 619 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 EFCAB12Q6NXP0 572 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 FAM43BQ6ZT52 329 aaPredicted RBP26.78■■□□□ 1.88
CDR2-202ENST00000561630 BANK1Q8NDB2 785 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 LINC01599Q8WXQ3 324 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 TGS1Q96RS0 853 aaKnown RBP26.78■■□□□ 1.88
CDR2-202ENST00000561630 YME1L1Q96TA2 773 aa26.78■■□□□ 1.88
CDR2-202ENST00000561630 GPR32O75388 356 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 VTNP04004 478 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 POU3F3P20264 500 aaPredicted RBP26.77■■□□□ 1.88
CDR2-202ENST00000561630 CRYBB1P53674 252 aaPredicted RBP26.77■■□□□ 1.88
CDR2-202ENST00000561630 ERVK-21P61565 698 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 TBC1D8BQ0IIM8 1120 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 KIZQ2M2Z5 673 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 FBXO18Q8NFZ0 1043 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 TMEM40Q8WWA1 233 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 MAP7D2Q96T17 732 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 SEPT9Q9UHD8 586 aaPredicted RBP26.77■■□□□ 1.88
CDR2-202ENST00000561630 MYO9BQ13459 2157 aa26.77■■□□□ 1.88
CDR2-202ENST00000561630 QARSP47897 775 aaKnown RBP26.76■■□□□ 1.87
CDR2-202ENST00000561630 SPIRE1Q08AE8 756 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 TMEM266Q2M3C6 531 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 RTN4RL1Q86UN2 441 aaPredicted RBP26.76■■□□□ 1.87
CDR2-202ENST00000561630 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.76■■□□□ 1.87
CDR2-202ENST00000561630 ZNF710Q8N1W2 664 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 LRRC71Q8N4P6 559 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 FAM184AQ8NB25 1140 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 CEP89Q96ST8 783 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 TSPYL2Q9H2G4 693 aaPredicted RBP26.76■■□□□ 1.87
CDR2-202ENST00000561630 TMX1Q9H3N1 280 aa26.76■■□□□ 1.87
CDR2-202ENST00000561630 NOC2LQ9Y3T9 749 aaKnown RBP26.76■■□□□ 1.87
CDR2-202ENST00000561630 TMEM150BA6NC51 233 aa26.75■■□□□ 1.87
CDR2-202ENST00000561630 DDX11L8A8MPP1 907 aa26.75■■□□□ 1.87
CDR2-202ENST00000561630 WNT7AO00755 349 aa26.75■■□□□ 1.87
CDR2-202ENST00000561630 RPS6KA5O75582 802 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms