RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ELF1P32519 619 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 CEP72Q9P209 647 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 GOLGA8QA0A0J9YX86 632 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 GOLGA8OA6NCC3 632 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 GOLGA8NF8WBI6 632 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 BRAFP15056 766 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 POLGP54098 1239 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 DNAAF3Q8N9W5 541 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 ACCSQ96QU6 501 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 ZWILCHQ9H900 591 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 PIH1D3Q9NQM4 214 aaKnown RBP10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 KIF28PB7ZC32 967 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 EIF3HO15372 352 aaKnown RBP eCLIP10.96□□□□□ -0.662e-6■■■□□ 14.9
GTF3C1-202ENST00000561623 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 MS4A14Q96JA4 679 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 ORC6Q9Y5N6 252 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 MDH1P40925 334 aaKnown RBP10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 PDZD4Q76G19 769 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 ZBTB8OSQ8IWT0 167 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 SPICE1Q8N0Z3 855 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 CHURC1Q8WUH1 139 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 CNKSR1Q969H4 720 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 AS3MTQ9HBK9 375 aa10.96□□□□□ -0.66
GTF3C1-202ENST00000561623 GSTA4O15217 222 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 KCNQ4P56696 695 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 ICA1Q05084 483 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 DYNLL2Q96FJ2 89 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TTC7AQ9ULT0 858 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CFAP73A6NFT4 308 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 COPEO14579 308 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 PPP1R37O75864 691 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 FOXD4Q12950 439 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 PSMD2Q13200 908 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CYB5R4Q7L1T6 521 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CCDC68Q9H2F9 335 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TRIM10Q9UDY6 481 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 MRPL11Q9Y3B7 192 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 MCF2P10911 925 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CD58P19256 250 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 DOK7Q18PE1 504 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 DCAF15Q66K64 600 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SHC4Q6S5L8 630 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TBC1D10CQ8IV04 446 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CCT8L2Q96SF2 557 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TLK1Q9UKI8 766 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 NEDD4P46934 1319 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 AFF2P51816 1311 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CYP2E1P05181 493 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 OSBPP22059 807 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CSRNP1Q96S65 589 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 HPCAL4Q9UM19 191 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CAPN11Q9UMQ6 739 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TARSL2A2RTX5 802 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 CTIFO43310 598 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 PCP11498 1178 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 FGFR4P22455 802 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 MYLK4Q86YV6 388 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 TRPV6Q9H1D0 765 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 SEPT9Q9UHD8 586 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 DNAJC12Q9UKB3 198 aa10.95□□□□□ -0.66
GTF3C1-202ENST00000561623 HSPA4LO95757 839 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 TBC1D22AQ8WUA7 517 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.667e-6■□□□□ 10.8
GTF3C1-202ENST00000561623 MXI1P50539 228 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 PRPSAP1Q14558 356 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 KRT26Q7Z3Y9 468 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 PDIK1LQ8N165 341 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 HSPH1Q92598 858 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 USP17L3A6NCW0 530 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 USP17L4A6NCW7 530 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 PI4K2BG5E9Z4 385 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 C4orf50Q6ZRC1 276 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 USP17L1Q7RTZ2 530 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.664e-7■■■□□ 18.4
GTF3C1-202ENST00000561623 SMARCAL1Q9NZC9 954 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 KCNG1Q9UIX4 513 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 TMTC4Q5T4D3 741 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 NDE1Q9NXR1 346 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 TCP11X1B4DZS4 312 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 AP2B1P63010 937 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 IQCB1Q15051 598 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 OR2W6PQ8NHA6 318 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 CD248Q9HCU0 757 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms