RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 RGS18Q9NS28 235 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 C1orf112Q9NSG2 853 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 LOXHD1Q8IVV2 1947 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 LOC730098B7Z3J9 87 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 NRIP1P48552 1158 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 MRE11P49959 708 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 GATMP50440 423 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 NOC2LQ9Y3T9 749 aaKnown RBP13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-204ENST00000561354 ZNF318Q5VUA4 2279 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 C9IYK1 514 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 BACH1O14867 736 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 GPR182O15218 404 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 MGEA5O60502 916 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 GLP2RO95838 553 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 ZNF76P36508 570 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 RTN1Q16799 776 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 PDE12Q6L8Q7 609 aaKnown RBP13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 MIS18BP1Q6P0N0 1132 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 RBM23Q86U06 439 aaKnown RBP13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 TMEM40Q8WWA1 233 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 NEK1Q96PY6 1258 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 ADAM2Q99965 735 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 TLE6Q9H808 572 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 ANO2Q9NQ90 1003 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 TMEM260Q9NX78 707 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 ST3GAL5Q9UNP4 418 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 GINS2Q9Y248 185 aa13.46□□□□□ -0.25
CARMIL3-204ENST00000561354 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 ZBTB42B2RXF5 422 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 ZBTB43O43298 467 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 PPFIA3O75145 1194 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 CYP3A4P08684 503 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 ATF7P17544 494 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 RCAN1P53805 252 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM189BP81408 668 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 PKN1Q16512 942 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 DHX32Q7L7V1 743 aaKnown RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 PLA2G4DQ86XP0 818 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 PHF7Q9BWX1 381 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 TMEM161AQ9NX61 479 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 USP15Q9Y4E8 981 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 TECTAO75443 2155 aa13.45□□□□□ -0.26
CARMIL3-204ENST00000561354 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 TBKBP1A7MCY6 615 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 FGF18O76093 207 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 C22orf31O95567 290 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 ATP4AP20648 1035 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 DUSP6Q16828 381 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 SWSAP1Q6NVH7 229 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 SUSD6Q92537 303 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 ATP6V0A4Q9HBG4 840 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 FAM217BQ9NTX9 383 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 TBC1D22BQ9NU19 505 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-204ENST00000561354 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
CARMIL3-204ENST00000561354 TMEM221A6NGB7 291 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms