RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CLCN3P51790 818 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 NPEPPSP55786 919 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 PSMC5P62195 406 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 TAF2Q6P1X5 1199 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 Q7L0L9 218 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 FERMT3Q86UX7 667 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 LRRC71Q8N4P6 559 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 PPP1R16BQ96T49 567 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 HSD17B14Q9BPX1 270 aa15.62■□□□□ 0.09
TPM1-230ENST00000561266 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
TPM1-230ENST00000561266 NIFKQ9BYG3 293 aaKnown RBP15.62■□□□□ 0.09
TPM1-230ENST00000561266 AGO3Q9H9G7 860 aaKnown RBP15.62■□□□□ 0.09
TPM1-230ENST00000561266 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.62■□□□□ 0.09
TPM1-230ENST00000561266 SMIM35A0A1B0GVV1 85 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 H3BQV1 296 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 CAND2O75155 1236 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 P4HBP07237 508 aaKnown RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 PFKMP08237 780 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 OR52Z1P0C646 297 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 GHRP10912 638 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 MYOGP15173 224 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 SYT1P21579 422 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 TECP42680 631 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 QARSP47897 775 aaKnown RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 TRAPPC10P48553 1259 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 RABGGTBP53611 331 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 DEFB103AP81534 67 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 MRPS6P82932 125 aaKnown RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 PTGDRQ13258 359 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 LPIN1Q14693 890 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 MTERF2Q49AM1 385 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 PLEKHG4Q58EX7 1191 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 ZNF668Q96K58 619 aaPredicted RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 LXNQ9BS40 222 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 NRBP2Q9NSY0 501 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 SEPT9Q9UHD8 586 aaPredicted RBP15.61■□□□□ 0.09
TPM1-230ENST00000561266 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
TPM1-230ENST00000561266 ZBBXA8MT70 800 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 MED24O75448 989 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 VTNP04004 478 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 XKR3Q5GH77 459 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 FBXO47Q5MNV8 452 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 EFCAB12Q6NXP0 572 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 FAM173BQ6P4H8 233 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 CNKSR3Q6P9H4 555 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.6■□□□□ 0.09
TPM1-230ENST00000561266 TMEM40Q8WWA1 233 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 FAM167AQ96KS9 214 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 NOL7Q9UMY1 257 aaKnown RBP15.6■□□□□ 0.09
TPM1-230ENST00000561266 MTMR6Q9Y217 621 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
TPM1-230ENST00000561266 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 VPS37CA5D8V6 355 aaPredicted RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 GPR32O75388 356 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 ARHGEF15O94989 841 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 WDR5P61964 334 aaKnown RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 RESTQ13127 1097 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 ECM1Q16610 540 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 TPH2Q8IWU9 490 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 C4orf19Q8IY42 314 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 METTL13Q8N6R0 699 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 SPRYD3Q8NCJ5 442 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 PBX4Q9BYU1 374 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 CELF4Q9BZC1 486 aaKnown RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 YBX2Q9Y2T7 364 aaKnown RBP15.59■□□□□ 0.09
TPM1-230ENST00000561266 TRPV2Q9Y5S1 764 aa15.59■□□□□ 0.09
TPM1-230ENST00000561266 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.09
TPM1-230ENST00000561266 CHD9Q3L8U1 2897 aa15.58■□□□□ 0.09
TPM1-230ENST00000561266 IGKV6-21A0A0C4DH24 114 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 PP2D1A8MPX8 630 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 PARNO95453 639 aaKnown RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 CD52P31358 61 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 SMAD3P84022 425 aaKnown RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 ORC2Q13416 577 aaPredicted RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 KIZQ2M2Z5 673 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 RTN4RL1Q86UN2 441 aaPredicted RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 CATSPER3Q86XQ3 398 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 LINC01599Q8WXQ3 324 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 TNPO1Q92973 898 aaKnown RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 TTYH1Q9H313 450 aaPredicted RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 ADAMTS10Q9H324 1103 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 CYP26B1Q9NR63 512 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
TPM1-230ENST00000561266 SLC4A7Q9Y6M7 1214 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 CDH23Q9H251 3354 aa15.58■□□□□ 0.08
TPM1-230ENST00000561266 CDC25AP30304 524 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 YWHABP31946 246 aaKnown RBP15.57■□□□□ 0.08
TPM1-230ENST00000561266 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
TPM1-230ENST00000561266 TMEM266Q2M3C6 531 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 RILPL1Q5EBL4 403 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 RSPH3Q86UC2 560 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 NME8Q8N427 588 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 PIGOQ8TEQ8 1089 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms