RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 ZNF28P17035 718 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 PTX3P26022 381 aaPredicted RBP7.09□□□□□ -1.27
HMG20A-211ENST00000560867 APEX1P27695 318 aaKnown RBP7.09□□□□□ -1.27
HMG20A-211ENST00000560867 ECE1P42892 770 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 AFF3P51826 1226 aaKnown RBP7.09□□□□□ -1.27
HMG20A-211ENST00000560867 BCAR1P56945 870 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 MAP3K12Q12852 859 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 TCERG1LQ5VWI1 586 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 IQSEC1Q6DN90 963 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 PRPF38AQ8NAV1 312 aaKnown RBP7.09□□□□□ -1.27
HMG20A-211ENST00000560867 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 ZFP69BQ9UJL9 534 aa7.09□□□□□ -1.27
HMG20A-211ENST00000560867 PRAMEF22A3QJZ6 481 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 TMPRSS15P98073 1019 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 DLX2Q07687 328 aaPredicted RBP7.08□□□□□ -1.28
HMG20A-211ENST00000560867 NFATC3Q12968 1075 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 PRAMEF18Q5VWM3 479 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 ESPNLQ6ZVH7 1005 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 REXO1L1PQ8IX06 675 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 LINC01356Q8N9X3 169 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 RPGRQ92834 1020 aaKnown RBP7.08□□□□□ -1.28
HMG20A-211ENST00000560867 ACAP3Q96P50 834 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 KCNG1Q9UIX4 513 aa7.08□□□□□ -1.28
HMG20A-211ENST00000560867 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 KNG1P01042 644 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 MC4RP32245 332 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 BROXQ5VW32 411 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 SLFN12LQ6IEE8 588 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 KANSL1Q7Z3B3 1105 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 ZSCAN18Q8TBC5 510 aaPredicted RBP7.07□□□□□ -1.28
HMG20A-211ENST00000560867 RSAD2Q8WXG1 361 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 AMNQ9BXJ7 453 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 SPATA6Q9NWH7 488 aaPredicted RBP7.07□□□□□ -1.28
HMG20A-211ENST00000560867 UCKL1Q9NWZ5 548 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
HMG20A-211ENST00000560867 DBX1A6NMT0 343 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 H0Y858 1186 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 NUAK1O60285 661 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 ID4P47928 161 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 KANK2Q63ZY3 851 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 KIAA1841Q6NSI8 718 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
HMG20A-211ENST00000560867 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 FAM126AQ9BYI3 521 aaPredicted RBP7.06□□□□□ -1.28
HMG20A-211ENST00000560867 HOMER2Q9NSB8 354 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 RBPJLQ9UBG7 517 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 FTSJ1Q9UET6 329 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 MSRAQ9UJ68 235 aa7.06□□□□□ -1.28
HMG20A-211ENST00000560867 NOC2LQ9Y3T9 749 aaKnown RBP7.06□□□□□ -1.28
HMG20A-211ENST00000560867 ST20-MTHFSA0A0A6YYL1 179 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 KDM1AO60341 852 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 IL18BPO95998 194 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 COL6A1P12109 1028 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
HMG20A-211ENST00000560867 CDKN1CP49918 316 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-211ENST00000560867 IL13RA1P78552 427 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 SLC6A3Q01959 620 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 SMAD4Q13485 552 aaKnown RBP7.05□□□□□ -1.28
HMG20A-211ENST00000560867 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 CARFQ8N187 725 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 RTF1Q92541 710 aaKnown RBP7.05□□□□□ -1.28
HMG20A-211ENST00000560867 ZSWIM3Q96MP5 696 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 TUBGCP5Q96RT8 1024 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 PITHD1Q9GZP4 211 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-211ENST00000560867 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 KCMF1Q9P0J7 381 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 CROTQ9UKG9 612 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 SPEF1Q9Y4P9 236 aa7.05□□□□□ -1.28
HMG20A-211ENST00000560867 ADCY2Q08462 1091 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 MOGSQ13724 837 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 RTP5Q14D33 572 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 PRAMEF9Q5VWM5 478 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 TMEM200BQ69YZ2 307 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 BMP8AQ7Z5Y6 402 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 SP8Q8IXZ3 490 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 IFNL2Q8IZJ0 200 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
HMG20A-211ENST00000560867 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-211ENST00000560867 YTHDC1Q96MU7 727 aaKnown RBP7.04□□□□□ -1.28
HMG20A-211ENST00000560867 TACO1Q9BSH4 297 aaKnown RBP7.04□□□□□ -1.28
HMG20A-211ENST00000560867 FFAR3O14843 346 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 PRPF6O94906 941 aaKnown RBP7.03□□□□□ -1.28
HMG20A-211ENST00000560867 POLD1P28340 1107 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 IL13P35225 146 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 ETV4P43268 484 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 GLRBP48167 497 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 GPR15P49685 360 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 GUCY2FP51841 1108 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 KRT85P78386 507 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 EXOSC10Q01780 885 aaKnown RBP7.03□□□□□ -1.28
HMG20A-211ENST00000560867 WDR72Q3MJ13 1102 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 GRAMD4Q6IC98 578 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 TRMT10BQ6PF06 316 aaKnown RBP7.03□□□□□ -1.28
HMG20A-211ENST00000560867 CXorf67Q86X51 503 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-211ENST00000560867 SIAH1Q8IUQ4 282 aa7.03□□□□□ -1.28
HMG20A-211ENST00000560867 RPUSD2Q8IZ73 545 aaKnown RBP7.03□□□□□ -1.28
HMG20A-211ENST00000560867 SSH1Q8WYL5 1049 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms