RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FAM26DQ5JW98 314 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 FERMT3Q86UX7 667 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 USP38Q8NB14 1042 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 BANK1Q8NDB2 785 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 ZNF396Q96N95 335 aaPredicted RBP15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 MTIF3Q9H2K0 278 aaKnown RBP15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 TCHHQ07283 1943 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 TRIP12Q14669 1992 aaPredicted RBP15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 DDX11L8A8MPP1 907 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 ZBTB42B2RXF5 422 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 SLITRK3O94933 977 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 YWHABP31946 246 aaKnown RBP15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 CYP2C18P33260 490 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 THPOP40225 353 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 RFC5P40937 340 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 IGBP1P78318 339 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 ZNF200P98182 395 aaPredicted RBP15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 DYDC2Q96IM9 177 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 IL23AQ9NPF7 189 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 ANKEF1Q9NU02 776 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 LRWD1Q9UFC0 647 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 SEPT9Q9UHD8 586 aaPredicted RBP15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 ATP6V1DQ9Y5K8 247 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 KDM3AQ9Y4C1 1321 aa15.64■□□□□ 0.09
PKNOX1-209ENST00000560448 RSPH10B2B2RC85 870 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 EFCAB14O75071 495 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 C22orf31O95567 290 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 F13A1P00488 732 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 RSPH10BP0C881 870 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 ACTN1P12814 892 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 CSF2RAP15509 400 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 SF3A1Q15459 793 aaKnown RBP15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 ANO5Q75V66 913 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 TPH2Q8IWU9 490 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 TDHQ8IZJ6 230 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 NACC1Q96RE7 527 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 MAP7D2Q96T17 732 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 CYP26B1Q9NR63 512 aa15.63■□□□□ 0.09
PKNOX1-209ENST00000560448 STBD1O95210 358 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CXCL10P02778 98 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 LONP1P36776 959 aaKnown RBP15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 DNM2P50570 870 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CCL23P55773 120 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CYP4A11Q02928 519 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CATSPER3Q86XQ3 398 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 PPP1R13LQ8WUF5 828 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CCDC43Q96MW1 224 aaKnown RBP15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 RGL1Q9NZL6 768 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 DBR1Q9UK59 544 aaKnown RBP15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 CFAP45Q9UL16 551 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 UMODL1Q5DID0 1318 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
PKNOX1-209ENST00000560448 IGKV6-21A0A0C4DH24 114 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 DGAT1O75907 488 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 YEATS4O95619 227 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 NASPP49321 788 aaPredicted RBP15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 CTTNQ14247 550 aaKnown RBP15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 TRAF7Q6Q0C0 670 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 LINC01465Q8N7H1 131 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 DNAJB3Q8WWF6 145 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 APBB2Q92870 758 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 CEP170P1Q96L14 293 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 CEP290O15078 2479 aa15.61■□□□□ 0.09
PKNOX1-209ENST00000560448 FGBP02675 491 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 MRPS6P82932 125 aaKnown RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 SLC39A14Q15043 492 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 PTPAQ15257 358 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 MTERF2Q49AM1 385 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 HYIQ5T013 277 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 EFCAB12Q6NXP0 572 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 RUFY4Q6ZNE9 571 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 KIAA0319LQ8IZA0 1049 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 METTL13Q8N6R0 699 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 SNX29Q8TEQ0 813 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 TRAPPC12Q8WVT3 735 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 WNT8BQ93098 351 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 CEP89Q96ST8 783 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 DHX33Q9H6R0 707 aaKnown RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 WRAP73Q9P2S5 460 aaPredicted RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 TRPV2Q9Y5S1 764 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 MYH15Q9Y2K3 1946 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 PPP6R2O75170 966 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 PTMSP20962 102 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 RARRES1P49788 294 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 MGAT3Q09327 533 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 CNKSR3Q6P9H4 555 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms