RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MARK3P27448 753 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 TCF7P36402 384 aaPredicted RBP23.32■■□□□ 1.32
PSEN1-225ENST00000560005 GRIK4Q16099 956 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 RTN4RL1Q86UN2 441 aaPredicted RBP23.32■■□□□ 1.32
PSEN1-225ENST00000560005 NPAS4Q8IUM7 802 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CRIPAKQ8N1N5 446 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 GBP4Q96PP9 640 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 SENP7Q9BQF6 1050 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 PNMA6FA0A0J9YX94 578 aa23.31■■□□□ 1.32
PSEN1-225ENST00000560005 METAP2P50579 478 aaKnown RBP eCLIP23.31■■□□□ 1.32
PSEN1-225ENST00000560005 GRM4Q14833 912 aa23.31■■□□□ 1.32
PSEN1-225ENST00000560005 APOA5Q6Q788 366 aa23.31■■□□□ 1.32
PSEN1-225ENST00000560005 ASIC4Q96FT7 647 aa23.31■■□□□ 1.32
PSEN1-225ENST00000560005 BRPF3Q9ULD4 1205 aa23.31■■□□□ 1.32
PSEN1-225ENST00000560005 MBLAC1A4D2B0 266 aaPredicted RBP23.3■■□□□ 1.32
PSEN1-225ENST00000560005 MRPS6P82932 125 aaKnown RBP23.3■■□□□ 1.32
PSEN1-225ENST00000560005 ST3GAL1Q11201 340 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 MARCH8Q5T0T0 291 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 CATIPQ7Z7H3 387 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 FAM184AQ8NB25 1140 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 SMARCC2Q8TAQ2 1214 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 ATOH1Q92858 354 aaPredicted RBP23.3■■□□□ 1.32
PSEN1-225ENST00000560005 ZBTB10Q96DT7 871 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 TLE6Q9H808 572 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 ERAP1Q9NZ08 941 aa23.3■■□□□ 1.32
PSEN1-225ENST00000560005 PTPRZ1P23471 2315 aaPredicted RBP23.3■■□□□ 1.32
PSEN1-225ENST00000560005 DMDP11532 3685 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 PER2O15055 1255 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 PPFIA3O75145 1194 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 AVPR2P30518 371 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 GATMP50440 423 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 IGBP1P78318 339 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 CCT2P78371 535 aaKnown RBP23.29■■□□□ 1.32
PSEN1-225ENST00000560005 RBM10P98175 930 aaKnown RBP23.29■■□□□ 1.32
PSEN1-225ENST00000560005 PCNX4Q63HM2 1172 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 LARP1BQ659C4 914 aaKnown RBP23.29■■□□□ 1.32
PSEN1-225ENST00000560005 GIMAP8Q8ND71 665 aaPredicted RBP23.29■■□□□ 1.32
PSEN1-225ENST00000560005 PIBF1Q8WXW3 757 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 FAM49AQ9H0Q0 323 aaPredicted RBP23.29■■□□□ 1.32
PSEN1-225ENST00000560005 PLXNA4Q9HCM2 1894 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 ATP6V1DQ9Y5K8 247 aa23.29■■□□□ 1.32
PSEN1-225ENST00000560005 NID2Q14112 1375 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 STX6O43752 255 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 BRD1O95696 1058 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 STAG3L1P0CL83 205 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 PTMSP20962 102 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 CLEC17AQ6ZS10 378 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 NLRX1Q86UT6 975 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 MICAL1Q8TDZ2 1067 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 GLG1Q92896 1179 aa23.28■■□□□ 1.32
PSEN1-225ENST00000560005 GSTTP1A0A1W2PQM5 241 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 GOLGA8AA7E2F4 631 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 ATP9AO75110 1047 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 DDAH1O94760 285 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 ATF7P17544 494 aaPredicted RBP23.27■■□□□ 1.32
PSEN1-225ENST00000560005 IBSPP21815 317 aaPredicted RBP23.27■■□□□ 1.32
PSEN1-225ENST00000560005 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 PTPN21Q16825 1174 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 IER5Q5VY09 327 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 USP17L6PQ6QN14 398 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 NSUN7Q8NE18 718 aaKnown RBP23.27■■□□□ 1.32
PSEN1-225ENST00000560005 VN1R2Q8NFZ6 395 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 SEPT1Q8WYJ6 367 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 SUSD6Q92537 303 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 IRF2BPLQ9H1B7 796 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 PADI3Q9ULW8 664 aa23.27■■□□□ 1.32
PSEN1-225ENST00000560005 H0Y858 1186 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 SCG2P13521 617 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 KCNA2P16389 499 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 SYT1P21579 422 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 XRRA1Q6P2D8 792 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 ZNF654Q8IZM8 581 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 TNPO1Q92973 898 aaKnown RBP23.26■■□□□ 1.31
PSEN1-225ENST00000560005 MAP3K14Q99558 947 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 SENP2Q9HC62 589 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 TLR9Q9NR96 1032 aa23.26■■□□□ 1.31
PSEN1-225ENST00000560005 RBM28Q9NW13 759 aaKnown RBP23.26■■□□□ 1.31
PSEN1-225ENST00000560005 GOLGA6L22H0YM25 854 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 PAK2Q13177 524 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 ATP8B4Q8TF62 1192 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 SMARCAD1Q9H4L7 1026 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 LRFN2Q9ULH4 789 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 TRPV2Q9Y5S1 764 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 SQORQ9Y6N5 450 aa23.25■■□□□ 1.31
PSEN1-225ENST00000560005 RIF1Q5UIP0 2472 aaKnown RBP23.24■■□□□ 1.31
PSEN1-225ENST00000560005 M0QZ92 97 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 PDGFBP01127 241 aaPredicted RBP23.24■■□□□ 1.31
PSEN1-225ENST00000560005 RPLP2P05387 115 aaKnown RBP23.24■■□□□ 1.31
PSEN1-225ENST00000560005 RTN1Q16799 776 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 DUSP6Q16828 381 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 SPOUT1Q5T280 376 aaKnown RBP23.24■■□□□ 1.31
PSEN1-225ENST00000560005 MICU3Q86XE3 530 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 FANCBQ8NB91 859 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 CUL5Q93034 780 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 GPRASP2Q96D09 838 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 PKD2L1Q9P0L9 805 aa23.24■■□□□ 1.31
PSEN1-225ENST00000560005 MEIS2O14770 477 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 ZSCAN22P10073 491 aaPredicted RBP23.23■■□□□ 1.31
PSEN1-225ENST00000560005 INSRRP14616 1297 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms