RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 NCOA5Q9HCD5 579 aaKnown RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 PCDHA10Q9Y5I2 948 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 MRPL42Q9Y6G3 142 aaKnown RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
LRRC28-213ENST00000559399 NCK2O43639 380 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 C22orf31O95567 290 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 MMP1P03956 469 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 IL9P15248 144 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 ATP4AP20648 1035 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 ODR4Q5SWX8 454 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 LENG9Q96B70 501 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 EPHX3Q9H6B9 360 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 ERVK-5Q9HDB9 667 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 SAMM50Q9Y512 469 aa16.92■□□□□ 0.3
LRRC28-213ENST00000559399 GRXCR2A6NFK2 248 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 WDR64B1ANS9 1081 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 SARSP49591 514 aaKnown RBP16.91■□□□□ 0.3
LRRC28-213ENST00000559399 CCT2P78371 535 aaKnown RBP16.91■□□□□ 0.3
LRRC28-213ENST00000559399 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
LRRC28-213ENST00000559399 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 FAM167AQ96KS9 214 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 CLDND1Q9NY35 253 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 GABBR1Q9UBS5 961 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 FAM50BQ9Y247 325 aa16.91■□□□□ 0.3
LRRC28-213ENST00000559399 NOC2LQ9Y3T9 749 aaKnown RBP16.91■□□□□ 0.3
LRRC28-213ENST00000559399 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 GPR182O15218 404 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CSPG5O95196 566 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CRYBB1P53674 252 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 NLRP5P59047 1200 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 TRMT1LQ7Z2T5 733 aaKnown RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 GJD3Q8N144 294 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 P2RX5Q93086 422 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 PPP1R16BQ96T49 567 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 ALG13Q9NP73 1137 aaKnown RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CD320Q9NPF0 282 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 C1orf112Q9NSG2 853 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-213ENST00000559399 PLAGL2Q9UPG8 496 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 PCDHB7Q9Y5E2 793 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CYP46A1Q9Y6A2 500 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 BDP1A6H8Y1 2624 aa16.9■□□□□ 0.3
LRRC28-213ENST00000559399 CPLX1O14810 134 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 MSH4O15457 936 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 MAGEB2O15479 319 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 MGEA5O60502 916 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 VTNP04004 478 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 SSTR3P32745 418 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-213ENST00000559399 GATMP50440 423 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 USP11P51784 963 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 HYAL1Q12794 435 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 SLC24A5Q71RS6 500 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
LRRC28-213ENST00000559399 RIT2Q99578 217 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 OSMRQ99650 979 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 ADAM2Q99965 735 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 C22orf23Q9BZE7 217 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 DISC1Q9NRI5 854 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 RGS18Q9NS28 235 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 RAPGEFL1Q9UHV5 662 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 ST3GAL5Q9UNP4 418 aa16.89■□□□□ 0.29
LRRC28-213ENST00000559399 GAS7O60861 476 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 OATP04181 439 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
LRRC28-213ENST00000559399 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 TMEM31Q5JXX7 168 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 LRCH2Q5VUJ6 765 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 PPP2R3CQ969Q6 453 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
LRRC28-213ENST00000559399 CHMP2AO43633 222 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 EDIL3O43854 480 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 GPR32O75388 356 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 DEXIO95424 95 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 ITGB1P05556 798 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 TMOD1P28289 359 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 SFNP31947 248 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 LTBRP36941 435 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 CLCN3P51790 818 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 JAK3P52333 1124 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 PRKCEQ02156 737 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 CAMK1Q14012 370 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms