RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TBX22Q9Y458 520 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 CYP17A1P05093 508 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 CSF2RBP32927 897 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 ETV4P43268 484 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 ROM1Q03395 351 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 TBC1D10BQ4KMP7 808 aaPredicted RBP4.87□□□□□ -1.63
SPG11-206ENST00000558093 PRAMEF9Q5VWM5 478 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 AHI1Q8N157 1196 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 AJUBAQ96IF1 538 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 AMNQ9BXJ7 453 aa4.87□□□□□ -1.63
SPG11-206ENST00000558093 UBA6A0AVT1 1052 aaPredicted RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 NPEPPSL1A6NEC2 478 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 ZNF891A8MT65 544 aaPredicted RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 GOLGA6L22H0YM25 854 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 PRRG2O14669 202 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 ZNF888P0CJ79 500 aaPredicted RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 SLC9A1P19634 815 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 APEX1P27695 318 aaKnown RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 MEOX1P50221 254 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 PPP2CBP62714 309 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 PPP2CAP67775 309 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 CD83Q01151 205 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 ALDH6A1Q02252 535 aaKnown RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 TOP3AQ13472 1001 aaPredicted RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 ZNF827Q17R98 1081 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 DALRD3Q5D0E6 543 aaKnown RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 NME9Q86XW9 330 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 PASD1Q8IV76 773 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 RTKN2Q8IZC4 609 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 NXPE1Q8N323 547 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 FOXB1Q99853 325 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 TARS2Q9BW92 718 aaKnown RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 KATNBL1Q9H079 304 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 TOMM22Q9NS69 142 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 THG1LQ9NWX6 298 aaKnown RBP4.86□□□□□ -1.63
SPG11-206ENST00000558093 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 NCANO14594 1321 aa4.86□□□□□ -1.63
SPG11-206ENST00000558093 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 DVL2O14641 736 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 CLSTN1O94985 981 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 MYCLP1P12525 358 aaPredicted RBP4.85□□□□□ -1.63
SPG11-206ENST00000558093 SCNN1BP51168 640 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 IL2P60568 153 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 SLC6A3Q01959 620 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 MOGSQ13724 837 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 STILQ15468 1287 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 SKOR2Q2VWA4 1001 aaPredicted RBP4.85□□□□□ -1.63
SPG11-206ENST00000558093 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 TTC38Q5R3I4 469 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 KANK2Q63ZY3 851 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 SLFN12LQ6IEE8 588 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 GIMAP6Q6P9H5 292 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 RTN4RL1Q86UN2 441 aaPredicted RBP4.85□□□□□ -1.63
SPG11-206ENST00000558093 KIF18BQ86Y91 864 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 ZZZ3Q8IYH5 903 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 C7orf31Q8N865 590 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 OR2W6PQ8NHA6 318 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 SCYL1Q96KG9 808 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 LRRC37BQ96QE4 947 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 TUBGCP5Q96RT8 1024 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 ZDHHC5Q9C0B5 715 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 KIAA1683Q9H0B3 1180 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 OXSMQ9NWU1 459 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 Q9UFV3 132 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 PTPN22Q9Y2R2 807 aa4.85□□□□□ -1.63
SPG11-206ENST00000558093 PDE8AO60658 829 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 APOL3O95236 402 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 F2P00734 622 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 PRLP01236 227 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 ITGB3P05106 788 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 ATP2A2P16615 1042 aaKnown RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 POU3F2P20265 443 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 RGS3P49796 1198 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 STAT5BP51692 787 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 KPNA1P52294 538 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 EPHB4P54760 987 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 OCRLQ01968 901 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 PCBP1Q15365 356 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPG11-206ENST00000558093 SLFN13Q68D06 897 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 TMEM200BQ69YZ2 307 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 SDE2Q6IQ49 451 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 LIMS2Q7Z4I7 341 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 PRRT2Q7Z6L0 340 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 C11orf74Q86VG3 221 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 CIR1Q86X95 450 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 CHST13Q8NET6 341 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 CHTF18Q8WVB6 975 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 LEO1Q8WVC0 666 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 RPGRQ92834 1020 aaKnown RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 GPR101Q96P66 508 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 LMF1Q96S06 567 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 ELF4Q99607 663 aaPredicted RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 H2AFY2Q9P0M6 372 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms