RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PRKCEQ02156 737 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 NR5A1Q13285 461 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 TMEM266Q2M3C6 531 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 EARS2Q5JPH6 523 aaKnown RBP18.67■□□□□ 0.58
VSX1-207ENST00000557285 NEK8Q86SG6 692 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 GDPD5Q8WTR4 605 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 CELF4Q9BZC1 486 aaKnown RBP18.67■□□□□ 0.58
VSX1-207ENST00000557285 INSL6Q9Y581 213 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 IGSF9BQ9UPX0 1349 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 LINC01553A4QN01 128 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 ZNF862O60290 1169 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 MARCH6O60337 910 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 PSMD10O75832 226 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 C22orf31O95567 290 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 OATP04181 439 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 RPLP2P05387 115 aaKnown RBP18.66■□□□□ 0.58
VSX1-207ENST00000557285 JAK3P52333 1124 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 PAK2Q13177 524 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 TRIM29Q14134 588 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 FAM167AQ96KS9 214 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 BRMS1Q9HCU9 246 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 REV3LO60673 3130 aa18.66■□□□□ 0.58
VSX1-207ENST00000557285 GTPBP6O43824 516 aaPredicted RBP18.65■□□□□ 0.58
VSX1-207ENST00000557285 VTNP04004 478 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 SFNP31947 248 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 CLCN3P51790 818 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 GUCY1B3Q02153 619 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 SKIV2LQ15477 1246 aaKnown RBP18.65■□□□□ 0.58
VSX1-207ENST00000557285 KIZQ2M2Z5 673 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 MOXD1Q6UVY6 613 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 KIAA0319LQ8IZA0 1049 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 TOP1MTQ969P6 601 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 MBOAT7Q96N66 472 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 TGS1Q96RS0 853 aaKnown RBP18.65■□□□□ 0.58
VSX1-207ENST00000557285 CDHR5Q9HBB8 845 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 SEPT9Q9UHD8 586 aaPredicted RBP18.65■□□□□ 0.58
VSX1-207ENST00000557285 TRANK1O15050 2925 aa18.65■□□□□ 0.58
VSX1-207ENST00000557285 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
VSX1-207ENST00000557285 TMEM150BA6NC51 233 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 DLL1O00548 723 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 ENPP3O14638 875 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 NFX1Q12986 1120 aaKnown RBP18.64■□□□□ 0.57
VSX1-207ENST00000557285 GRB10Q13322 594 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 NME8Q8N427 588 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 BANK1Q8NDB2 785 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
VSX1-207ENST00000557285 SH2D3AQ9BRG2 576 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 C17orf80Q9BSJ5 609 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 NRBP2Q9NSY0 501 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 PADI3Q9ULW8 664 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 AKT3Q9Y243 479 aa18.64■□□□□ 0.57
VSX1-207ENST00000557285 GCFC2P16383 781 aaKnown RBP18.63■□□□□ 0.57
VSX1-207ENST00000557285 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
VSX1-207ENST00000557285 MTERF2Q49AM1 385 aa18.63■□□□□ 0.57
VSX1-207ENST00000557285 EFCAB12Q6NXP0 572 aa18.63■□□□□ 0.57
VSX1-207ENST00000557285 LINC01599Q8WXQ3 324 aa18.63■□□□□ 0.57
VSX1-207ENST00000557285 OSMRQ99650 979 aa18.63■□□□□ 0.57
VSX1-207ENST00000557285 MTCH2Q9Y6C9 303 aa18.63■□□□□ 0.57
VSX1-207ENST00000557285 VCANP13611 3396 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 BTBD18B2RXH4 712 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 EML1O00423 815 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 MMP1P03956 469 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 ERVK-21P61565 698 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 DIS3L2Q8IYB7 885 aaKnown RBP18.62■□□□□ 0.57
VSX1-207ENST00000557285 FBXO22Q8NEZ5 403 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 TMEM40Q8WWA1 233 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 SCLT1Q96NL6 688 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 KIF2CQ99661 725 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 NOC2LQ9Y3T9 749 aaKnown RBP18.62■□□□□ 0.57
VSX1-207ENST00000557285 NLRC5Q86WI3 1866 aa18.62■□□□□ 0.57
VSX1-207ENST00000557285 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 MAGEB2O15479 319 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 RPS6KA5O75582 802 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 ATP2B1P20020 1258 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 TBC1D8BQ0IIM8 1120 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 NCAPH2Q6IBW4 605 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 PPP4R3AQ6IN85 833 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 RDM1Q8NG50 284 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 TNFRSF25Q93038 417 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 MAP7D2Q96T17 732 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 NAP1L4Q99733 375 aaKnown RBP18.61■□□□□ 0.57
VSX1-207ENST00000557285 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 VAV3Q9UKW4 847 aa18.61■□□□□ 0.57
VSX1-207ENST00000557285 KDM3AQ9Y4C1 1321 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 LPXNO60711 386 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 TMOD1P28289 359 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 B3GNT9Q6UX72 402 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 RTN4RL1Q86UN2 441 aaPredicted RBP18.6■□□□□ 0.57
VSX1-207ENST00000557285 SP7Q8TDD2 431 aaPredicted RBP18.6■□□□□ 0.57
VSX1-207ENST00000557285 HAS1Q92839 578 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms