RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
SNX6-209ENST00000557265 ITGB3BPQ13352 177 aaPredicted RBP14.05□□□□□ -0.16
SNX6-209ENST00000557265 SLC24A5Q71RS6 500 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 RGS18Q9NS28 235 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 C1orf112Q9NSG2 853 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 TYW1Q9NV66 732 aaKnown RBP14.05□□□□□ -0.16
SNX6-209ENST00000557265 FAM86C1Q9NVL1 165 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 HCSTQ9UBK5 93 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 RBM8AQ9Y5S9 174 aaKnown RBP14.05□□□□□ -0.16
SNX6-209ENST00000557265 CACNA1HO95180 2353 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 NFASCO94856 1347 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 DOCK5Q9H7D0 1870 aa14.05□□□□□ -0.16
SNX6-209ENST00000557265 ATG2AQ2TAZ0 1938 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 C9IYK1 514 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 FSCN2O14926 492 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 CALM1P0DP23 149 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 CALM2P0DP24 149 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 CALM3P0DP25 149 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 AVPR2P30518 371 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 MCM5P33992 734 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 SLC26A2P50443 739 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 APOBRQ0VD83 1088 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 COL9A3Q14050 684 aaPredicted RBP14.04□□□□□ -0.16
SNX6-209ENST00000557265 PTPN21Q16825 1174 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 PDE12Q6L8Q7 609 aaKnown RBP14.04□□□□□ -0.16
SNX6-209ENST00000557265 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
SNX6-209ENST00000557265 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 TMEM40Q8WWA1 233 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 PGBD1Q96JS3 809 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 APOL5Q9BWW9 433 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 S1PR5Q9H228 398 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 AGO4Q9HCK5 861 aaKnown RBP14.04□□□□□ -0.16
SNX6-209ENST00000557265 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
SNX6-209ENST00000557265 ST3GAL5Q9UNP4 418 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
SNX6-209ENST00000557265 BACH1O14867 736 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 GPR182O15218 404 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 ATG7O95352 703 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 CCNE2O96020 404 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 SRGAP2BP0DMP2 458 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 FGFR1P11362 822 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 TECP42680 631 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 KCNC3Q14003 757 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 CEP55Q53EZ4 464 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 PLPP4Q5VZY2 271 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 ANKRD54Q6NXT1 300 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 TMTC3Q6ZXV5 915 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 FANCBQ8NB91 859 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 ATOH1Q92858 354 aaPredicted RBP14.03□□□□□ -0.16
SNX6-209ENST00000557265 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 ATP6V0A4Q9HBG4 840 aa14.03□□□□□ -0.16
SNX6-209ENST00000557265 IGKV6D-21A0A0A0MT36 114 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
SNX6-209ENST00000557265 MEIS1O00470 390 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 HBP1O60381 514 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 GFRA3O60609 400 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.17
SNX6-209ENST00000557265 LIFRP42702 1097 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 KIZQ2M2Z5 673 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 ODR4Q5SWX8 454 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 LLGL2Q6P1M3 1020 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 SYCE2Q6PIF2 218 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 PPP1R16BQ96T49 567 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 TCF25Q9BQ70 676 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 IRF2BPLQ9H1B7 796 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 CWH43Q9H720 699 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 TMEM161AQ9NX61 479 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 PUF60Q9UHX1 559 aaKnown RBP14.02□□□□□ -0.17
SNX6-209ENST00000557265 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 KAT6AQ92794 2004 aa14.02□□□□□ -0.17
SNX6-209ENST00000557265 HIDE1A8MVS5 230 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 FOSP01100 380 aaPredicted RBP14.01□□□□□ -0.17
SNX6-209ENST00000557265 PDGFBP01127 241 aaPredicted RBP14.01□□□□□ -0.17
SNX6-209ENST00000557265 LAG3P18627 525 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 CRYBB1P53674 252 aaPredicted RBP14.01□□□□□ -0.17
SNX6-209ENST00000557265 NAPAP54920 295 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 FAM189BP81408 668 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 PLCB3Q01970 1234 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 ZNF484Q5JVG2 852 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 FAM160B1Q5W0V3 765 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 TYW1BQ6NUM6 668 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
SNX6-209ENST00000557265 RASGRP4Q8TDF6 673 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
SNX6-209ENST00000557265 OSMRQ99650 979 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 LRRC2Q9BYS8 371 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 RIC8AQ9NPQ8 531 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 ENTPD7Q9NQZ7 604 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SNX6-209ENST00000557265 ZBTB42B2RXF5 422 aa14□□□□□ -0.17
SNX6-209ENST00000557265 H0Y858 1186 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms