RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CYP46A1Q9Y6A2 500 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 ZBTB42B2RXF5 422 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 STAG3L1P0CL83 205 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 SSRP1Q08945 709 aaKnown RBP25.6■■□□□ 1.69
ACTN1-220ENST00000556433 TRIM22Q8IYM9 498 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 CRIPAKQ8N1N5 446 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 TMX1Q9H3N1 280 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 SH3GLB2Q9NR46 395 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 GABBR1Q9UBS5 961 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 SAMM50Q9Y512 469 aa25.6■■□□□ 1.69
ACTN1-220ENST00000556433 BDP1A6H8Y1 2624 aa25.59■■□□□ 1.69
ACTN1-220ENST00000556433 GRM6O15303 877 aa25.59■■□□□ 1.69
ACTN1-220ENST00000556433 RPS6KA5O75582 802 aa25.59■■□□□ 1.69
ACTN1-220ENST00000556433 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.59■■□□□ 1.69
ACTN1-220ENST00000556433 LENG9Q96B70 501 aa25.59■■□□□ 1.69
ACTN1-220ENST00000556433 LARP6Q9BRS8 491 aaKnown RBP25.59■■□□□ 1.69
ACTN1-220ENST00000556433 NOC2LQ9Y3T9 749 aaKnown RBP25.59■■□□□ 1.69
ACTN1-220ENST00000556433 EDIL3O43854 480 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 IBSPP21815 317 aaPredicted RBP25.58■■□□□ 1.69
ACTN1-220ENST00000556433 USP11P51784 963 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 EP400NLQ6ZTU2 488 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 CMTR2Q8IYT2 770 aaKnown RBP25.58■■□□□ 1.69
ACTN1-220ENST00000556433 METTL13Q8N6R0 699 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 LMAN2LQ9H0V9 348 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 ERVK-5Q9HDB9 667 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 LRFN2Q9ULH4 789 aa25.58■■□□□ 1.69
ACTN1-220ENST00000556433 MRPL42Q9Y6G3 142 aaKnown RBP25.58■■□□□ 1.69
ACTN1-220ENST00000556433 MYO7AQ13402 2215 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 CPLX1O14810 134 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 MSH4O15457 936 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 C22orf31O95567 290 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 ZNF274Q96GC6 653 aaPredicted RBP25.57■■□□□ 1.68
ACTN1-220ENST00000556433 PPP1R16BQ96T49 567 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 PLVAPQ9BX97 442 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 TM6SF1Q9BZW5 370 aa25.57■■□□□ 1.68
ACTN1-220ENST00000556433 WDR64B1ANS9 1081 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 COL9A1P20849 921 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 KIZQ2M2Z5 673 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 PAN2Q504Q3 1202 aaKnown RBP25.56■■□□□ 1.68
ACTN1-220ENST00000556433 ODR4Q5SWX8 454 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 PTCRAQ6ISU1 281 aaPredicted RBP25.56■■□□□ 1.68
ACTN1-220ENST00000556433 FAM43BQ6ZT52 329 aaPredicted RBP25.56■■□□□ 1.68
ACTN1-220ENST00000556433 NEK9Q8TD19 979 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 TMEM40Q8WWA1 233 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 PABPC5Q96DU9 382 aaKnown RBP25.56■■□□□ 1.68
ACTN1-220ENST00000556433 UPF3BQ9BZI7 483 aaKnown RBP25.56■■□□□ 1.68
ACTN1-220ENST00000556433 DISC1Q9NRI5 854 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 PCDHA4Q9UN74 947 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 ST3GAL5Q9UNP4 418 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 CEP131Q9UPN4 1083 aa25.56■■□□□ 1.68
ACTN1-220ENST00000556433 NLRC5Q86WI3 1866 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 H3BQ06 376 aaPredicted RBP25.55■■□□□ 1.68
ACTN1-220ENST00000556433 GPR182O15218 404 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 MGEA5O60502 916 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 SARSP49591 514 aaKnown RBP25.55■■□□□ 1.68
ACTN1-220ENST00000556433 CRYBB1P53674 252 aaPredicted RBP25.55■■□□□ 1.68
ACTN1-220ENST00000556433 STK3Q13188 491 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 TBCKQ8TEA7 893 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 FAM167AQ96KS9 214 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 RIT2Q99578 217 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 C1QTNF1Q9BXJ1 281 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 ALG13Q9NP73 1137 aaKnown RBP25.55■■□□□ 1.68
ACTN1-220ENST00000556433 NRBP2Q9NSY0 501 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 PLAGL2Q9UPG8 496 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 PCDHB7Q9Y5E2 793 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 RALGAPA2Q2PPJ7 1873 aa25.55■■□□□ 1.68
ACTN1-220ENST00000556433 DENND3A2RUS2 1198 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 MAGEB2O15479 319 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 GAS7O60861 476 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 DEXIO95424 95 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 VTNP04004 478 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 GATMP50440 423 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 PUS10Q3MIT2 529 aaKnown RBP25.54■■□□□ 1.68
ACTN1-220ENST00000556433 CPLX2Q6PUV4 134 aaKnown RBP25.54■■□□□ 1.68
ACTN1-220ENST00000556433 SLC5A5Q92911 643 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 OSMRQ99650 979 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 ADAM2Q99965 735 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 C22orf23Q9BZE7 217 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 EPHX3Q9H6B9 360 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 RGS18Q9NS28 235 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 PDRG1Q9NUG6 133 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 CLDND1Q9NY35 253 aa25.54■■□□□ 1.68
ACTN1-220ENST00000556433 LOXHD1Q8IVV2 1947 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 EVPLQ92817 2033 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 GRXCR2A6NFK2 248 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 NCK2O43639 380 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 CSPG5O95196 566 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 NEFLP07196 543 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 IL9P15248 144 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 COL19A1Q14993 1142 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 LRCH2Q5VUJ6 765 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 EFCAB12Q6NXP0 572 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 P2RX5Q93086 422 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 TEKT3Q9BXF9 490 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 CD320Q9NPF0 282 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 C1orf112Q9NSG2 853 aa25.53■■□□□ 1.68
ACTN1-220ENST00000556433 CHMP2AO43633 222 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 ZNF862O60290 1169 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 GPR32O75388 356 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 OATP04181 439 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms