RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 RMND1Q9NWS8 449 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 HDAC6Q9UBN7 1215 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM98Q9Y2Y6 226 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ITIH6Q6UXX5 1313 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 MEIS2O14770 477 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 OPLAHO14841 1288 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TAL1P17542 331 aaPredicted RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 YY1P25490 414 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TNNI2P48788 182 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ICA1Q05084 483 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC93Q567U6 631 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 USP17L6PQ6QN14 398 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 FCHSD1Q86WN1 690 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 GMLQ99445 158 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 NUP88Q99567 741 aaPredicted RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 C7orf25Q9BPX7 421 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 MAGEF1Q9HAY2 307 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 PPP2R2CQ9Y2T4 447 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 SLC45A1Q9Y2W3 748 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CNTNAP1P78357 1384 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 A0A0U1RQJ8 604 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SOWAHDA6NJG2 315 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KCNJ18B7U540 433 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZSCAN9O15535 394 aaPredicted RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PPIP5K2O43314 1243 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 MFAP3LO75121 409 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CASP14P31944 242 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SLC1A4P43007 532 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 EHHADHQ08426 723 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 GRM1Q13255 1194 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KCNJ12Q14500 433 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 RAD9BQ6WBX8 426 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ARHGAP27Q6ZUM4 889 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM179Q6ZVK1 233 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CDAN1Q8IWY9 1227 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 LRRN4CLQ8ND94 238 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF483Q8TF39 744 aaPredicted RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CUL5Q93034 780 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 FAXDC2Q96IV6 333 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PANX2Q96RD6 677 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CTAGE1Q96RT6 745 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SEPT10Q9P0V9 454 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF215Q9UL58 517 aaPredicted RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TRIM17Q9Y577 477 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PARP14Q460N5 1801 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SPDYE2BA6NHP3 402 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 MYMKA6NI61 221 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 F5H6K3 240 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 LSM1O15116 133 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ENTPD3O75355 529 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 NDUFB10O96000 172 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SPDYE6P0CI01 402 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CYP2C19P33261 490 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 COPB1P53618 953 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ETF1P62495 437 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 RASSF7Q02833 373 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KLRC3Q07444 240 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KIAA1755Q5JYT7 1200 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SLFN13Q68D06 897 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PACS2Q86VP3 889 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZSCAN29Q8IWY8 852 aaPredicted RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 GMCL1P1Q8NEA9 526 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 GSDMBQ8TAX9 411 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF507Q8TCN5 953 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 DCAF4Q8WV16 495 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 VPS16Q9H269 839 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC68Q9H2F9 335 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PSTPIP2Q9H939 334 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KIF9Q9HAQ2 790 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 KMT5AQ9NQR1 393 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 TAB2Q9NYJ8 693 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 LRWD1Q9UFC0 647 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 AKR1B15C9JRZ8 316 aaPredicted RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 GH2P01242 217 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 GCFC2P16383 781 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 CLNS1AP54105 237 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SNAP25P60880 206 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PDIA5Q14554 519 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SMC1AQ14683 1233 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SEPT7Q16181 437 aaKnown RBP5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ABCB5Q2M3G0 1257 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SLC5A9Q2M3M2 681 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF449Q6P9G9 518 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 NEK11Q8NG66 645 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 PARD3BQ8TEW8 1205 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 SAAL1Q96ER3 474 aa5.56□□□□□ -1.52
TMEM260-210ENST00000556422 EEF2KMTQ96G04 330 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms