RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 A0A1W2PRX2 142 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 AGRPO00253 132 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 B3GALT2O43825 422 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 SUSD5O60279 629 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 NASPP49321 788 aaPredicted RBP5.4□□□□□ -1.54
SRP54-207ENST00000555535 SMAD3P84022 425 aaKnown RBP5.4□□□□□ -1.54
SRP54-207ENST00000555535 BTBD8Q5XKL5 378 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 MICALCLQ6ZW33 695 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 FAM169BQ8N8A8 192 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 THAP3Q8WTV1 239 aaPredicted RBP5.4□□□□□ -1.54
SRP54-207ENST00000555535 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 KCNJ15Q99712 375 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 BTBD2Q9BX70 525 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 AGO3Q9H9G7 860 aaKnown RBP5.4□□□□□ -1.54
SRP54-207ENST00000555535 FAM184BQ9ULE4 1060 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 FZD1Q9UP38 647 aa5.4□□□□□ -1.54
SRP54-207ENST00000555535 FAM47E-STBD1D6RA91 191 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 MSCO60682 206 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 ABHD16AO95870 558 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 CTGFP29279 349 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 Q6ZRM9 215 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 GAREM2Q75VX8 874 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 VRK3Q8IV63 474 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 ZNF276Q8N554 614 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 DCAF4Q8WV16 495 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 NELL1Q92832 810 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 EPN3Q9H201 632 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 CDC42EP3Q9UKI2 254 aa5.39□□□□□ -1.55
SRP54-207ENST00000555535 CAPNS1P04632 268 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 ITGB1P05556 798 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 PTPN1P18031 435 aaKnown RBP5.38□□□□□ -1.55
SRP54-207ENST00000555535 RABL3Q5HYI8 236 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 FAM178BQ8IXR5 827 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 PROKR1Q8TCW9 393 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 GPR87Q9BY21 358 aa5.38□□□□□ -1.55
SRP54-207ENST00000555535 GOLGA6L6A8MZA4 724 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 GJA8P48165 433 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 C6orf15Q6UXA7 325 aaPredicted RBP5.37□□□□□ -1.55
SRP54-207ENST00000555535 USP53Q70EK8 1073 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
SRP54-207ENST00000555535 RIC8BQ9NVN3 520 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 VWA7Q9Y334 891 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 XDHP47989 1333 aa5.37□□□□□ -1.55
SRP54-207ENST00000555535 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 HERVK_113P62684 666 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 HECTD2Q5U5R9 776 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 KCNV1Q6PIU1 500 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 OLFML1Q6UWY5 402 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 LRRC55Q6ZSA7 311 aa5.36□□□□□ -1.55
SRP54-207ENST00000555535 SOD2P04179 222 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 AOAHP28039 575 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 SESN2P58004 480 aaPredicted RBP5.35□□□□□ -1.55
SRP54-207ENST00000555535 GPR85P60893 370 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 GRAMD4Q6IC98 578 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 DPH6Q7L8W6 267 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 RD3Q7Z3Z2 195 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 HDGFL2Q7Z4V5 671 aaPredicted RBP5.35□□□□□ -1.55
SRP54-207ENST00000555535 IFNL3Q8IZI9 196 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 CD244Q9BZW8 370 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 TRPS1Q9UHF7 1281 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 SRPK3Q9UPE1 567 aa5.35□□□□□ -1.55
SRP54-207ENST00000555535 KIAA0355O15063 1070 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 FAM20BO75063 409 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 ECE1P42892 770 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 CD83Q01151 205 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 EP400NLQ6ZTU2 488 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 HTR3DQ70Z44 454 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 ANAPC16Q96DE5 110 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 ALG1Q9BT22 464 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 IER2Q9BTL4 223 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 OR10A5Q9H207 317 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 SYNPO2LQ9H987 977 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 CYP4F11Q9HBI6 524 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 ATP23Q9Y6H3 246 aa5.34□□□□□ -1.55
SRP54-207ENST00000555535 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.33□□□□□ -1.56
SRP54-207ENST00000555535 PPP2R2AP63151 447 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 MOGSQ13724 837 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 ELAVL1Q15717 326 aaKnown RBP5.33□□□□□ -1.56
SRP54-207ENST00000555535 TNNI3KQ59H18 835 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 KANK2Q63ZY3 851 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 EEPD1Q7L9B9 569 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 SLC6A15Q9H2J7 730 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 ACTR10Q9NZ32 417 aa5.33□□□□□ -1.56
SRP54-207ENST00000555535 CTDP1Q9Y5B0 961 aaPredicted RBP5.33□□□□□ -1.56
SRP54-207ENST00000555535 COL4A3Q01955 1670 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 FAM90A27PA6NNH2 459 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 DLX3O60479 287 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
SRP54-207ENST00000555535 MAP3K12Q12852 859 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 GPR19Q15760 415 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 FIGNQ5HY92 759 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 MFSD5Q6N075 450 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 FAM111BQ6SJ93 734 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 HS3ST4Q9Y661 456 aa5.32□□□□□ -1.56
SRP54-207ENST00000555535 MFAP3LO75121 409 aa5.31□□□□□ -1.56
SRP54-207ENST00000555535 H2AFYO75367 372 aaKnown RBP5.31□□□□□ -1.56
SRP54-207ENST00000555535 GRIA2P42262 883 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms