RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ZSCAN5CA6NGD5 496 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 G3V3G9 751 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ASAP2O43150 1006 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 BUB1O43683 1085 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 GNA14O95837 355 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 HLTFQ14527 1009 aaKnown RBP eCLIP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ZKSCAN8Q15776 578 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 UAP1Q16222 522 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 PPP2R5EQ16537 467 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 MYOCDQ8IZQ8 938 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 RAPGEF5Q92565 580 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 PCDHA12Q9UN75 941 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 GREB1LQ9C091 1923 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 POTEMA6NI47 508 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 F8W031 263 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 PPIP5K2O43314 1243 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CYP3A7P24462 503 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 PDE6BP35913 854 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 LMNB2Q03252 620 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 BYSLQ13895 437 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 DYMQ7RTS9 669 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 HOOK3Q86VS8 718 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CEP57Q86XR8 500 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CCDC26Q8TAB7 109 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 HAS1Q92839 578 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 FAXDC2Q96IV6 333 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 CEP63Q96MT8 703 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 PSMD1Q99460 953 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 TRIM6Q9C030 488 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 EBF2Q9HAK2 575 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 AIPL1Q9NZN9 384 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
MTHFD1-210ENST00000555252 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 PPP1R11O60927 126 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 RTN2O75298 545 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 KIF4AO95239 1232 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 ATP6V1G2O95670 118 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 DRD4P21917 467 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 SCP2P22307 547 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 KLRC1P26715 233 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 AP3B2Q13367 1082 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 UBE2SQ16763 222 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 ERMARDQ5T6L9 678 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 APOBEC3HQ6NTF7 200 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 SLFN12Q8IYM2 578 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 CCDC197Q8NCU1 140 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 TLCD1Q96CP7 247 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 ZDHHC15Q96MV8 337 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 FAM129AQ9BZQ8 928 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 CCT8L1PA6NM43 557 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 CRKP46108 304 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 ELF3P78545 371 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 HPS3Q969F9 1004 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 DNAJC19Q96DA6 116 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■■□□□ 13.9
MTHFD1-210ENST00000555252 CCDC134Q9H6E4 229 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
MTHFD1-210ENST00000555252 TBX3O15119 743 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 TRIM37O94972 964 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 COASYQ13057 564 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 CLUL1Q15846 466 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 QPCTQ16769 361 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 ZCWPW2Q504Y3 356 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms