RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 DNM2P50570 870 aa7.67□□□□□ -1.18
VRK1-203ENST00000555067 PTH1RQ03431 593 aa7.67□□□□□ -1.18
VRK1-203ENST00000555067 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
VRK1-203ENST00000555067 TRIM8Q9BZR9 551 aa7.67□□□□□ -1.18
VRK1-203ENST00000555067 ZDHHC5Q9C0B5 715 aa7.67□□□□□ -1.18
VRK1-203ENST00000555067 IL13RA1P78552 427 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 STILQ15468 1287 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 AGBL4Q5VU57 503 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 TAX1BP1Q86VP1 789 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 EXTL1Q92935 676 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 WNK4Q96J92 1243 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 SLC52A2Q9HAB3 445 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 MSL2Q9HCI7 577 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 SNTG2Q9NY99 539 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 NDOR1Q9UHB4 597 aa7.66□□□□□ -1.18
VRK1-203ENST00000555067 HMGCRP04035 888 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 MCM7P33993 719 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 RBL2Q08999 1139 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 TRIM61Q5EBN2 209 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 CISD2Q8N5K1 135 aaKnown RBP7.65□□□□□ -1.18
VRK1-203ENST00000555067 BTBD2Q9BX70 525 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 CELF4Q9BZC1 486 aaKnown RBP7.65□□□□□ -1.18
VRK1-203ENST00000555067 OAZ3Q9UMX2 235 aa7.65□□□□□ -1.18
VRK1-203ENST00000555067 CCDC163A0A0D9SF12 145 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 EIF5BO60841 1220 aaKnown RBP7.64□□□□□ -1.19
VRK1-203ENST00000555067 COMTP21964 271 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 CANXP27824 592 aaKnown RBP7.64□□□□□ -1.19
VRK1-203ENST00000555067 MC4RP32245 332 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 RRADP55042 308 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 NFYCQ13952 458 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 RNF151Q2KHN1 245 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 LSM12Q3MHD2 195 aaKnown RBP7.64□□□□□ -1.19
VRK1-203ENST00000555067 Q6ZSN1 163 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 NOSTRINQ8IVI9 506 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 WDR48Q8TAF3 677 aa7.64□□□□□ -1.19
VRK1-203ENST00000555067 KCNK3O14649 394 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 CR2P20023 1033 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 NANOS3P60323 173 aaKnown RBP7.63□□□□□ -1.19
VRK1-203ENST00000555067 EIF4HQ15056 248 aaKnown RBP7.63□□□□□ -1.19
VRK1-203ENST00000555067 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 FUKQ8N0W3 1084 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 ZSWIM2Q8NEG5 633 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 MKL1Q969V6 931 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 MAGEB10Q96LZ2 347 aaPredicted RBP7.63□□□□□ -1.19
VRK1-203ENST00000555067 KCNH7Q9NS40 1196 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 SFMBT1Q9UHJ3 866 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 NR2E1Q9Y466 385 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 SLC30A1Q9Y6M5 507 aa7.63□□□□□ -1.19
VRK1-203ENST00000555067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.62□□□□□ -1.19
VRK1-203ENST00000555067 FAM221BA6H8Z2 402 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 ARHGAP6O43182 974 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 RAD17O75943 681 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 MPIG6BO95866 241 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 ADCY8P40145 1251 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 ECE1P42892 770 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 KCNQ1P51787 676 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 DGCR2P98153 550 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 SOGA3Q5TF21 947 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 POLNQ7Z5Q5 900 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 JMYQ8N9B5 988 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 SRPK1Q96SB4 655 aaKnown RBP7.62□□□□□ -1.19
VRK1-203ENST00000555067 CSRNP2Q9H175 543 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 OR10A5Q9H207 317 aa7.62□□□□□ -1.19
VRK1-203ENST00000555067 SCDO00767 359 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 RASGRP1O95267 797 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 NPTXRO95502 500 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 MMEP08473 750 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 INHBCP55103 352 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 KANK2Q63ZY3 851 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 TMEM200BQ69YZ2 307 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 OTOP2Q7RTS6 562 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 UBXN4Q92575 508 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 DPYSL5Q9BPU6 564 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 AMNQ9BXJ7 453 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 MRPL4Q9BYD3 311 aaKnown RBP7.61□□□□□ -1.19
VRK1-203ENST00000555067 UCKL1Q9NWZ5 548 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 COQ6Q9Y2Z9 468 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 ASB1Q9Y576 335 aa7.61□□□□□ -1.19
VRK1-203ENST00000555067 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 A0A0G2JNJ9 132 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 CDC14BO60729 498 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 SEC23AQ15436 765 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 USP30Q70CQ3 517 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 SLC7A14Q8TBB6 771 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 THAP3Q8WTV1 239 aaPredicted RBP7.6□□□□□ -1.19
VRK1-203ENST00000555067 ASB15Q8WXK1 588 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 DNAJC7Q99615 494 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 Q9UFV3 132 aa7.6□□□□□ -1.19
VRK1-203ENST00000555067 PUF60Q9UHX1 559 aaKnown RBP7.6□□□□□ -1.19
VRK1-203ENST00000555067 A0A087X1B8 175 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 SLC12A8A0AV02 714 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 FOXP2O15409 715 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 KCNQ2O43526 872 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 HIP1RO75146 1068 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 SDHAP31040 664 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 RPS19P39019 145 aaKnown RBP7.59□□□□□ -1.19
VRK1-203ENST00000555067 MEOX1P50221 254 aa7.59□□□□□ -1.19
VRK1-203ENST00000555067 LARP4Q71RC2 724 aaKnown RBP eCLIP7.59□□□□□ -1.194e-6■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms