RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SPPL3Q8TCT6 385 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 TMEM40Q8WWA1 233 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 ERVK-5Q9HDB9 667 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 NCK2O43639 380 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 MMP1P03956 469 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 ITGB1P05556 798 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 ZNF76P36508 570 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 NTRK3Q16288 839 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 SWSAP1Q6NVH7 229 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 Q6ZUG5 572 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 P2RX5Q93086 422 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 MAFBQ9Y5Q3 323 aaPredicted RBP13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 TECTAO75443 2155 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 WDFY4Q6ZS81 3184 aa13.9□□□□□ -0.18
MTHFD1-207ENST00000554677 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 COL1A2P08123 1366 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 NID2Q14112 1375 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 M0QZ92 97 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 BACH1O14867 736 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 LINC01565O15544 149 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 CIITAP33076 1130 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 HSPA4P34932 840 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 IRS1P35568 1242 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 METAP2P50579 478 aaKnown RBP eCLIP13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 ZP2Q05996 745 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 PAK2Q13177 524 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 ADAM15Q13444 863 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 ZNF484Q5JVG2 852 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 PDXDC2PQ6P474 469 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 KLHL23Q8NBE8 558 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 BRF1Q92994 677 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 LENG9Q96B70 501 aa13.89□□□□□ -0.19
MTHFD1-207ENST00000554677 MYO10Q9HD67 2058 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 C9IYK1 514 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 MBTPS2O43462 519 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 TBX10O75333 385 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 GPR32O75388 356 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 C22orf31O95567 290 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 STAG3L1P0CL83 205 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 SSTR3P32745 418 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 ADGRD2Q7Z7M1 963 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 PHKBQ93100 1093 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 JAKMIP1Q96N16 626 aaKnown RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 PRKAG3Q9UGI9 489 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 ST3GAL5Q9UNP4 418 aa13.88□□□□□ -0.19
MTHFD1-207ENST00000554677 PIEZO1Q92508 2521 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 CSPG5O95196 566 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 EVCP57679 992 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM189BP81408 668 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 DSC3Q14574 896 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 SMAD2Q15796 467 aaKnown RBP13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 CLUL1Q15846 466 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 MIS18BP1Q6P0N0 1132 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM228AQ86W67 206 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 ADHFE1Q8IWW8 467 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 MSLNLQ96KJ4 702 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 ADAM2Q99965 735 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 TBC1D22BQ9NU19 505 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
MTHFD1-207ENST00000554677 PRR33A8MZF0 331 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 ZNF862O60290 1169 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 RPS6KA5O75582 802 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 VTNP04004 478 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 CRYBB1P53674 252 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-207ENST00000554677 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms