RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CLDND1Q9NY35 253 aa12.02□□□□□ -0.49
SHMT2-215ENST00000554656 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 LINC01565O15544 149 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 EDIL3O43854 480 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 MMP1P03956 469 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ITGB1P05556 798 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 CYP3A4P08684 503 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 SCG2P13521 617 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 KLRC1P26715 233 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 KRT76Q01546 638 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ZP2Q05996 745 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 PAK2Q13177 524 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 KRT32Q14532 448 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 EP400NLQ6ZTU2 488 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ADGRD2Q7Z7M1 963 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 CMTR2Q8IYT2 770 aaKnown RBP12.01□□□□□ -0.49
SHMT2-215ENST00000554656 KIAA0319LQ8IZA0 1049 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ZMYND12Q9H0C1 365 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 ALG13Q9NP73 1137 aaKnown RBP12.01□□□□□ -0.49
SHMT2-215ENST00000554656 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 NAP1L2Q9ULW6 460 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-215ENST00000554656 PLAGL2Q9UPG8 496 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 RWDD3Q9Y3V2 267 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
SHMT2-215ENST00000554656 M0QZ92 97 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 IPO5O00410 1097 aaKnown RBP12□□□□□ -0.49
SHMT2-215ENST00000554656 BACH1O14867 736 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 HBP1O60381 514 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 PPFIA3O75145 1194 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 C22orf31O95567 290 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 PSMA5P28066 241 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 IRS1P35568 1242 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 SLC26A2P50443 739 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 METAP2P50579 478 aaKnown RBP eCLIP12□□□□□ -0.491e-6■■■□□ 18.9
SHMT2-215ENST00000554656 CLUL1Q15846 466 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 PDXDC2PQ6P474 469 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 Q6ZUG5 572 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 SPPL3Q8TCT6 385 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 BRF1Q92994 677 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 P2RX5Q93086 422 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 LENG9Q96B70 501 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
SHMT2-215ENST00000554656 PPP1R16BQ96T49 567 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 PLVAPQ9BX97 442 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 FTHL17Q9BXU8 183 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 GLT8D2Q9H1C3 349 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 NOC2LQ9Y3T9 749 aaKnown RBP12□□□□□ -0.49
SHMT2-215ENST00000554656 PCDHGC5Q9Y5F6 944 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 COL1A2P08123 1366 aa12□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF318Q5VUA4 2279 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 K7ELQ4 463 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-215ENST00000554656 SSTR3P32745 418 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF76P36508 570 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 SARSP49591 514 aaKnown RBP11.99□□□□□ -0.49
SHMT2-215ENST00000554656 NTRK3Q16288 839 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
SHMT2-215ENST00000554656 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 SWSAP1Q6NVH7 229 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 NME8Q8N427 588 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 KLHL23Q8NBE8 558 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 PHKBQ93100 1093 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF302Q9NR11 478 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 GINS2Q9Y248 185 aa11.99□□□□□ -0.49
SHMT2-215ENST00000554656 C9IYK1 514 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 MBTPS2O43462 519 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF862O60290 1169 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 GPR32O75388 356 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 GLP2RO95838 553 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 VTNP04004 478 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 NFX1Q12986 1120 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 SMAD2Q15796 467 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 MIS18BP1Q6P0N0 1132 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 FAM228AQ86W67 206 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 ADHFE1Q8IWW8 467 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 REXO1Q8N1G1 1221 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 FAM122AQ96E09 287 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 OSMRQ99650 979 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 ADAM2Q99965 735 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 ZNF577Q9BSK1 485 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 IGFLR1Q9H665 355 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 MAFBQ9Y5Q3 323 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-215ENST00000554656 TECTAO75443 2155 aa11.98□□□□□ -0.49
SHMT2-215ENST00000554656 RPS6KA5O75582 802 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 STAG3L1P0CL83 205 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
SHMT2-215ENST00000554656 CIITAP33076 1130 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms