RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 C6orf50Q9HD87 102 aa25.29■■□□□ 1.64
GABRB3-206ENST00000554556 TCEAL9Q9UHQ7 104 aa25.29■■□□□ 1.64
GABRB3-206ENST00000554556 KIAA1671Q9BY89 1806 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 C19orf67A6NJJ6 358 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 FAM86B1E9PN63 330 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 IPO5O00410 1097 aaKnown RBP25.28■■□□□ 1.64
GABRB3-206ENST00000554556 MBTPS2O43462 519 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 CDC45O75419 566 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 CSPG5O95196 566 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 ITGB1P05556 798 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 FAM86B2P0C5J1 330 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 METAP2P50579 478 aaKnown RBP eCLIP25.28■■□□□ 1.64
GABRB3-206ENST00000554556 ADAM15Q13444 863 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 SMAD2Q15796 467 aaKnown RBP25.28■■□□□ 1.64
GABRB3-206ENST00000554556 TMEM266Q2M3C6 531 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 SWSAP1Q6NVH7 229 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 CCDC60Q8IWA6 550 aaPredicted RBP25.28■■□□□ 1.64
GABRB3-206ENST00000554556 CKAP2LQ8IYA6 745 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 KIAA0319LQ8IZA0 1049 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 KLHL23Q8NBE8 558 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 TMX1Q9H3N1 280 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 ERVK-5Q9HDB9 667 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 C1orf112Q9NSG2 853 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 TBC1D22BQ9NU19 505 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 CD207Q9UJ71 328 aa25.28■■□□□ 1.64
GABRB3-206ENST00000554556 ESYT2A0FGR8 921 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 DENND3A2RUS2 1198 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 GPR182O15218 404 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 ADD1P35611 737 aaKnown RBP25.27■■□□□ 1.64
GABRB3-206ENST00000554556 SETQ01105 290 aaPredicted RBP25.27■■□□□ 1.64
GABRB3-206ENST00000554556 DLX2Q07687 328 aaPredicted RBP25.27■■□□□ 1.64
GABRB3-206ENST00000554556 SMAD4Q13485 552 aaKnown RBP25.27■■□□□ 1.64
GABRB3-206ENST00000554556 CAMK1Q14012 370 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 CLUL1Q15846 466 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 POF1BQ8WVV4 589 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 UIMC1Q96RL1 719 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 ZNF577Q9BSK1 485 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 ZMYND12Q9H0C1 365 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 AAASQ9NRG9 546 aa25.27■■□□□ 1.64
GABRB3-206ENST00000554556 IGLV3-22A0A075B6J6 115 aa25.26■■□□□ 1.63
GABRB3-206ENST00000554556 DHX15O43143 795 aaKnown RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 IBSPP21815 317 aaPredicted RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 GNA11P29992 359 aa25.26■■□□□ 1.63
GABRB3-206ENST00000554556 GTF2F1P35269 517 aaKnown RBP eCLIP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 NDUFV1P49821 464 aa25.26■■□□□ 1.63
GABRB3-206ENST00000554556 SPOUT1Q5T280 376 aaKnown RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 ZNF746Q6NUN9 644 aaPredicted RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 BBXQ8WY36 941 aaPredicted RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 RGS18Q9NS28 235 aa25.26■■□□□ 1.63
GABRB3-206ENST00000554556 NOC2LQ9Y3T9 749 aaKnown RBP25.26■■□□□ 1.63
GABRB3-206ENST00000554556 PCDHB12Q9Y5F1 795 aa25.26■■□□□ 1.63
GABRB3-206ENST00000554556 HOXD11P31277 338 aaPredicted RBP25.25■■□□□ 1.63
GABRB3-206ENST00000554556 AKAP17AQ02040 695 aaKnown RBP25.25■■□□□ 1.63
GABRB3-206ENST00000554556 SLC24A5Q71RS6 500 aa25.25■■□□□ 1.63
GABRB3-206ENST00000554556 SMAP1Q8IYB5 467 aaPredicted RBP25.25■■□□□ 1.63
GABRB3-206ENST00000554556 REXO1Q8N1G1 1221 aaKnown RBP25.25■■□□□ 1.63
GABRB3-206ENST00000554556 CRYGNQ8WXF5 182 aa25.25■■□□□ 1.63
GABRB3-206ENST00000554556 ADAM2Q99965 735 aa25.25■■□□□ 1.63
GABRB3-206ENST00000554556 CDHR5Q9HBB8 845 aa25.25■■□□□ 1.63
GABRB3-206ENST00000554556 ST3GAL5Q9UNP4 418 aa25.25■■□□□ 1.63
GABRB3-206ENST00000554556 FNDC1Q4ZHG4 1894 aaPredicted RBP25.24■■□□□ 1.63
GABRB3-206ENST00000554556 LINC01565O15544 149 aa25.24■■□□□ 1.63
GABRB3-206ENST00000554556 TBX10O75333 385 aa25.24■■□□□ 1.63
GABRB3-206ENST00000554556 PSAPP07602 524 aa25.24■■□□□ 1.63
GABRB3-206ENST00000554556 DNAJB1P25685 340 aa25.24■■□□□ 1.63
GABRB3-206ENST00000554556 CRYBB1P53674 252 aaPredicted RBP25.24■■□□□ 1.63
GABRB3-206ENST00000554556 CEP131Q9UPN4 1083 aa25.24■■□□□ 1.63
GABRB3-206ENST00000554556 MAFBQ9Y5Q3 323 aaPredicted RBP25.24■■□□□ 1.63
GABRB3-206ENST00000554556 PRPF3O43395 683 aaKnown RBP25.23■■□□□ 1.63
GABRB3-206ENST00000554556 MGEA5O60502 916 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 ATP4AP20648 1035 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 IRS1P35568 1242 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 GATMP50440 423 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 UBE3AQ05086 875 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 APOBRQ0VD83 1088 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 Q6ZUG5 572 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 METTL13Q8N6R0 699 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 EFHBQ8N7U6 833 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 BICD2Q8TD16 824 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 PCDHA10Q9Y5I2 948 aa25.23■■□□□ 1.63
GABRB3-206ENST00000554556 TBKBP1A7MCY6 615 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 MAGEB2O15479 319 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 BLOC1S2Q6QNY1 142 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 SKAP1Q86WV1 359 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 MICAL1Q8TDZ2 1067 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 TMEM40Q8WWA1 233 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 BRF1Q92994 677 aa25.22■■□□□ 1.63
GABRB3-206ENST00000554556 PLXNA4Q9HCM2 1894 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 ZBTB42B2RXF5 422 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 C9IYK1 514 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 C22orf31O95567 290 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 EYA4O95677 639 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 NRIP1P48552 1158 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 KIZQ2M2Z5 673 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 PRR16Q569H4 304 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 TRMT1LQ7Z2T5 733 aaKnown RBP25.21■■□□□ 1.63
GABRB3-206ENST00000554556 ADGRD2Q7Z7M1 963 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 ZNF710Q8N1W2 664 aa25.21■■□□□ 1.63
GABRB3-206ENST00000554556 KCNB2Q92953 911 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms