RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 GIMAP8Q8ND71 665 aaPredicted RBP3.49□□□□□ -1.85
IFT43-208ENST00000554423 ASB15Q8WXK1 588 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 DLG3Q92796 817 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 MBD6Q96DN6 1003 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 LMF1Q96S06 567 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 RBM15Q96T37 977 aaKnown RBP eCLIP3.49□□□□□ -1.85
IFT43-208ENST00000554423 ZDHHC5Q9C0B5 715 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 OR10A5Q9H207 317 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 DEF6Q9H4E7 631 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 SYNPO2Q9UMS6 1093 aa3.49□□□□□ -1.85
IFT43-208ENST00000554423 A0A0G2JNJ9 132 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 GOLGA6L22H0YM25 854 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 KCNK3O14649 394 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 GAS7O60861 476 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 H2AFYO75367 372 aaKnown RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 KRT37O76014 449 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 HMGCRP04035 888 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 KCNA6P17658 529 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 CSF2RBP32927 897 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 ETV4P43268 484 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 TOP3AQ13472 1001 aaPredicted RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 SQSTM1Q13501 440 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 SART3Q15020 963 aaKnown RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 EIF4HQ15056 248 aaKnown RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 GRAMD4Q6IC98 578 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 FGD2Q7Z6J4 655 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 NOP9Q86U38 636 aaKnown RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 NOSTRINQ8IVI9 506 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 ZZZ3Q8IYH5 903 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 DVL3Q92997 716 aaPredicted RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 LPPQ93052 612 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 UCKL1Q9NWZ5 548 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 PPP4R1LQ9P1A2 415 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 BTBD7Q9P203 1132 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 Q9UFV3 132 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 SRRDQ9UH36 339 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 PLAAQ9Y263 795 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 MYRFQ9Y2G1 1151 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 NR2E1Q9Y466 385 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 TCAF1Q9Y4C2 921 aa3.48□□□□□ -1.85
IFT43-208ENST00000554423 TNPO3Q9Y5L0 923 aaKnown RBP3.48□□□□□ -1.85
IFT43-208ENST00000554423 ADAMTS20P59510 1910 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PTPDC1A2A3K4 754 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PPP1R12AO14974 1030 aaPredicted RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 CDC45O75419 566 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 MAFO75444 373 aaPredicted RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 CLSTN1O94985 981 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 JMJD7P0C870 316 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 RPS19P39019 145 aaKnown RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 KCNQ1P51787 676 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 NEK4P51957 841 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 KIF11P52732 1056 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 OCRLQ01968 901 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PABPC4Q13310 644 aaKnown RBP eCLIP3.47□□□□□ -1.85
IFT43-208ENST00000554423 TTC38Q5R3I4 469 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PIK3R6Q5UE93 754 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 CDCA2Q69YH5 1023 aaPredicted RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 USP30Q70CQ3 517 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 LIMS2Q7Z4I7 341 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PPM1KQ8N3J5 372 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 RPGRQ92834 1020 aaKnown RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 ERCC4Q92889 916 aaPredicted RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 GFM2Q969S9 779 aaKnown RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 CLUHP3Q96NS8 147 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 FOXB1Q99853 325 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 OR10A2Q9H208 303 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 C12orf65Q9H3J6 166 aaKnown RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 SAE1Q9UBE0 346 aaPredicted RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 B4GALT6Q9UBX8 382 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 PUF60Q9UHX1 559 aaKnown RBP3.47□□□□□ -1.85
IFT43-208ENST00000554423 VWA7Q9Y334 891 aa3.47□□□□□ -1.85
IFT43-208ENST00000554423 ARHGAP6O43182 974 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 ZNF623O75123 536 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 DNAJC8O75937 253 aaPredicted RBP3.46□□□□□ -1.86
IFT43-208ENST00000554423 SCNN1BP51168 640 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 MECP2P51608 486 aaKnown RBP3.46□□□□□ -1.86
IFT43-208ENST00000554423 BCAR1P56945 870 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 IL13RA1P78552 427 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 CD83Q01151 205 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 HHEXQ03014 270 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 MOGSQ13724 837 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 EPHA7Q15375 998 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 SEC23AQ15436 765 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 ABHD17CQ6PCB6 329 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 GPR155Q7Z3F1 870 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 TAX1BP1Q86VP1 789 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 NINJ1Q92982 152 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 NEIL1Q96FI4 390 aaPredicted RBP3.46□□□□□ -1.86
IFT43-208ENST00000554423 FAM89AQ96GI7 184 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 RNPC3Q96LT9 517 aaKnown RBP3.46□□□□□ -1.86
IFT43-208ENST00000554423 C8orf49Q96NF6 230 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 LRRC37BQ96QE4 947 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 FEZ1Q99689 392 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 C1QTNF3Q9BXJ4 246 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 NELFAQ9H3P2 528 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 FANCLQ9NW38 375 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 KCNG1Q9UIX4 513 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 FAM184BQ9ULE4 1060 aa3.46□□□□□ -1.86
IFT43-208ENST00000554423 UBA6A0AVT1 1052 aaPredicted RBP3.45□□□□□ -1.86
IFT43-208ENST00000554423 PMS2P1A4D2B8 440 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms