RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SWSAP1Q6NVH7 229 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 B3GNT9Q6UX72 402 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 HERC6Q8IVU3 1022 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 DBF4BQ8NFT6 615 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 RDM1Q8NG50 284 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 ETNPPLQ8TBG4 499 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 APBB2Q92870 758 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 NAP1L4Q99733 375 aaKnown RBP8.51□□□□□ -1.05
LINC00640-201ENST00000554409 LLPHQ9BRT6 129 aaKnown RBP8.51□□□□□ -1.05
LINC00640-201ENST00000554409 TEKT3Q9BXF9 490 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 NKX2-4Q9H2Z4 354 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 SLC28A3Q9HAS3 691 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 PCDHA2Q9Y5H9 948 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 SQORQ9Y6N5 450 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 COL4A4P53420 1690 aaPredicted RBP8.5□□□□□ -1.05
LINC00640-201ENST00000554409 CCDC194A0A1B0GVG4 234 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 SMIM35A0A1B0GVV1 85 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 ZBTB42B2RXF5 422 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 TBX3O15119 743 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 MMP1P03956 469 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 KRT2P35908 639 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 JAK3P52333 1124 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 IGBP1P78318 339 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 DEFB103AP81534 67 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 MRPS6P82932 125 aaKnown RBP8.5□□□□□ -1.05
LINC00640-201ENST00000554409 GRIN2CQ14957 1233 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 ZNF484Q5JVG2 852 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 LRCH2Q5VUJ6 765 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 PDXDC2PQ6P474 469 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 MTHFD1LQ6UB35 978 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 PIK3AP1Q6ZUJ8 805 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 NEK8Q86SG6 692 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 NME8Q8N427 588 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 USP38Q8NB14 1042 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 TRAPPC12Q8WVT3 735 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 MYLIPQ8WY64 445 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 SEPT8Q92599 483 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 FAM167AQ96KS9 214 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 ZSCAN31Q96LW9 406 aaPredicted RBP8.5□□□□□ -1.05
LINC00640-201ENST00000554409 OSBPL7Q9BZF2 842 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 UNC45AQ9H3U1 944 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 BRMS1Q9HCU9 246 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 KCNMB3Q9NPA1 279 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
LINC00640-201ENST00000554409 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 GJB4Q9NTQ9 266 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 GABBR1Q9UBS5 961 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 DDX25Q9UHL0 483 aaKnown RBP8.5□□□□□ -1.05
LINC00640-201ENST00000554409 KDM3AQ9Y4C1 1321 aa8.5□□□□□ -1.05
LINC00640-201ENST00000554409 EVPLQ92817 2033 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 RALGAPA2Q2PPJ7 1873 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 KIF28PB7ZC32 967 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 M0QZ92 97 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 SLC37A4O43826 429 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 JAK2O60674 1132 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 DTNBO60941 627 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 GJB5O95377 273 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 C22orf31O95567 290 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 AMHP03971 560 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 CA3P07451 260 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 NUDT7P0C024 238 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 MYOGP15173 224 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 FOSL2P15408 326 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 KLRC1P26715 233 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 LPIN1Q14693 890 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 RABEP1Q15276 862 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 LETM2Q2VYF4 491 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 EARS2Q5JPH6 523 aaKnown RBP8.49□□□□□ -1.05
LINC00640-201ENST00000554409 FBXO47Q5MNV8 452 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 IER5Q5VY09 327 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 KRT40Q6A162 431 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 TSHZ1Q6ZSZ6 1077 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 FAM43BQ6ZT52 329 aaPredicted RBP8.49□□□□□ -1.05
LINC00640-201ENST00000554409 ZBTB10Q96DT7 871 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 FAM20AQ96MK3 541 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 UIMC1Q96RL1 719 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 IFIH1Q9BYX4 1025 aaKnown RBP8.49□□□□□ -1.05
LINC00640-201ENST00000554409 CEP131Q9UPN4 1083 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 SAMM50Q9Y512 469 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 CDY2AQ9Y6F7 541 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 ARID2Q68CP9 1835 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 NLRC5Q86WI3 1866 aa8.49□□□□□ -1.05
LINC00640-201ENST00000554409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 MAGEB2O15479 319 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 CHMP2AO43633 222 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 TLL1O43897 1013 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 ZNF862O60290 1169 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 OATP04181 439 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 GHRP10912 638 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 HMGN5P82970 282 aaKnown RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 HTRA4P83105 476 aaPredicted RBP8.48□□□□□ -1.05
LINC00640-201ENST00000554409 PRKCEQ02156 737 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 NR5A1Q13285 461 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 PPP2R5CQ13362 524 aa8.48□□□□□ -1.05
LINC00640-201ENST00000554409 TRIM29Q14134 588 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms