RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SEC24BO95487 1268 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 ITGB1P05556 798 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 IRS1P35568 1242 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 LTBRP36941 435 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 KRT76Q01546 638 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 SMAD2Q15796 467 aaKnown RBP10.05□□□□□ -0.8
TDP1-208ENST00000553989 RTN1Q16799 776 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 FAM160B1Q5W0V3 765 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 RBM23Q86U06 439 aaKnown RBP10.05□□□□□ -0.8
TDP1-208ENST00000553989 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
TDP1-208ENST00000553989 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 KLHL23Q8NBE8 558 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 POF1BQ8WVV4 589 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 P2RX5Q93086 422 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 PPP1R16BQ96T49 567 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
TDP1-208ENST00000553989 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
TDP1-208ENST00000553989 MUTYHQ9UIF7 546 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 PCDHB7Q9Y5E2 793 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 PCDHA2Q9Y5H9 948 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 SQORQ9Y6N5 450 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 NFASCO94856 1347 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 CNTNAP5Q8WYK1 1306 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 IGSF9BQ9UPX0 1349 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 SMIM35A0A1B0GVV1 85 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 FOSP01100 380 aaPredicted RBP10.04□□□□□ -0.8
TDP1-208ENST00000553989 ARP10275 920 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 PTMSP20962 102 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 NRIP1P48552 1158 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 GATMP50440 423 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 FGD1P98174 961 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 CTC1Q2NKJ3 1217 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 NAALADL2Q58DX5 795 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 MTHFD1LQ6UB35 978 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 PLPPR4Q7Z2D5 763 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
TDP1-208ENST00000553989 ADGRD2Q7Z7M1 963 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 NME8Q8N427 588 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 TCEANC2Q96MN5 208 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 AGO4Q9HCK5 861 aaKnown RBP10.04□□□□□ -0.8
TDP1-208ENST00000553989 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 AAASQ9NRG9 546 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 CHMP5Q9NZZ3 219 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 PCDHB12Q9Y5F1 795 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 MYO7AQ13402 2215 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 TTC3P53804 2025 aa10.04□□□□□ -0.8
TDP1-208ENST00000553989 GOLGA8AA7E2F4 631 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 GOLGA8BA8MQT2 603 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 ZBTB43O43298 467 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 HBP1O60381 514 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 KLRC1P26715 233 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 SARSP49591 514 aaKnown RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 SLC26A2P50443 739 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 ITGB3BPQ13352 177 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 AP3B2Q13367 1082 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 ADAM15Q13444 863 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 APOA5Q6Q788 366 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 HFE2Q6ZVN8 426 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 RTN4RL1Q86UN2 441 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 SGMS1Q86VZ5 419 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 PLA2G4DQ86XP0 818 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 THNSL1Q8IYQ7 743 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 SPPL3Q8TCT6 385 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 SNX21Q969T3 373 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 MFSD14AQ96MC6 490 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 NEK1Q96PY6 1258 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 TLE6Q9H808 572 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 BARX2Q9UMQ3 279 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
TDP1-208ENST00000553989 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
TDP1-208ENST00000553989 GPR182O15218 404 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 SRGAP2BP0DMP2 458 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 DNAJB1P25685 340 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
TDP1-208ENST00000553989 CAMK1Q14012 370 aa10.02□□□□□ -0.81
TDP1-208ENST00000553989 NECTIN1Q15223 517 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms