RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TGFB1I1O43294 461 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 CEP104O60308 925 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 GCNT3O95395 438 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 NDUFB10O96000 172 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 XRCC5P13010 732 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 NOP2P46087 812 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 ICA1Q05084 483 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 RPS6KA1Q15418 735 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 ALKBH5Q6P6C2 394 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 GBP6Q6ZN66 633 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 KIAA0825Q8IV33 1275 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 METTL13Q8N6R0 699 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 PIGOQ8TEQ8 1089 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 NAP1L4Q99733 375 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 PLAAQ9Y263 795 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 SUGT1Q9Y2Z0 365 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 FAM169AQ9Y6X4 670 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 MYH11P35749 1972 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 GFPT2O94808 682 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 NMT1P30419 496 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 FLT3P36888 993 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 SREBF1P36956 1147 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 PRKCIP41743 596 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TNNC1P63316 161 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 CTTNQ14247 550 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 RRP1BQ14684 758 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 BMT2Q1RMZ1 405 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 CERKLQ49MI3 558 aaPredicted RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 Q4G0T1 1027 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZC2HC1CQ53FD0 456 aaPredicted RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 MOXD1Q6UVY6 613 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 HHIPL2Q6UWX4 724 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 KDM7AQ6ZMT4 941 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 SCFD2Q8WU76 684 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 KAT2BQ92831 832 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 OSGEPQ9NPF4 335 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TYW1Q9NV66 732 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 DNM3Q9UQ16 869 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 PCDHB13Q9Y5F0 798 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 BHMG1C9JSJ3 638 aaPredicted RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 F5H6K3 240 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 PDXKO00764 312 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 CHMP2AO43633 222 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZEB2O60315 1214 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 NR1D1P20393 614 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 HSD17B3P37058 310 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 LIG3P49916 1009 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 KLRC3Q07444 240 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TTC31Q49AM3 519 aaPredicted RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TADA2BQ86TJ2 420 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 SPICE1Q8N0Z3 855 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TAF4BQ92750 862 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 MKL1Q969V6 931 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 BORCS6Q96GS4 357 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 CELF4Q9BZC1 486 aaKnown RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 NYAP2Q9P242 653 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 BCS1LQ9Y276 419 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 STXBP5LQ9Y2K9 1186 aa7.57□□□□□ -1.2
LINC-ROR-201ENST00000553704 IGLV3-22A0A075B6J6 115 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 A0A1W2PRG0 241 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 TMCO5BA8MYB1 307 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 UBAP1LF5GYI3 381 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 PGRMC1O00264 195 aaKnown RBP7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 CALUO43852 315 aaPredicted RBP7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 TRIM49P0CI25 452 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 TRIM49CP0CI26 452 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 LSP1P33241 339 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 UBXN2AP68543 259 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 IKQ13123 557 aaPredicted RBP7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 CEP85LQ5SZL2 805 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 DCAF12L1Q5VU92 463 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 MAATS1Q7Z4T9 603 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 PALB2Q86YC2 1186 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 CD302Q8IX05 232 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 EFCAB13Q8IY85 973 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 BANK1Q8NDB2 785 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 ERMNQ8TAM6 284 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 ACTRT1Q8TDG2 376 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 WHAMMQ8TF30 809 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 U2AF1L4Q8WU68 220 aaKnown RBP7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 ATP6V1G3Q96LB4 118 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 ISCUQ9H1K1 167 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 WRAP73Q9P2S5 460 aaPredicted RBP7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 AMACRQ9UHK6 382 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 RABGAP1Q9Y3P9 1069 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 NR2E1Q9Y466 385 aa7.56□□□□□ -1.2
LINC-ROR-201ENST00000553704 SHTN1A0MZ66 631 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms