RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 G2E3Q7L622 706 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 ADAT2Q7Z6V5 191 aaKnown RBP5.89□□□□□ -1.47
ATXN3-220ENST00000553491 IRF2BP1Q8IU81 584 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 KSR1Q8IVT5 923 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 SYNE4Q8N205 404 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 TTLL6Q8N841 843 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-220ENST00000553491 ZNF526Q8TF50 670 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-220ENST00000553491 SGSM3Q96HU1 749 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 FCRL2Q96LA5 508 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-220ENST00000553491 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 SLC12A9Q9BXP2 914 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-220ENST00000553491 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 TMEM260Q9NX78 707 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 WHRNQ9P202 907 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 KIAA1551Q9HCM1 1747 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 IQCA1LA6NCM1 817 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PPM1BO75688 479 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 TSPAN15O95858 294 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 GSNP06396 782 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 HSD3B2P26439 372 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 SLFN5Q08AF3 891 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 SYDE1Q6ZW31 735 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 ZBTB38Q8NAP3 1195 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 BVESQ8NE79 360 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 BRF1Q92994 677 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PPP1R14AQ96A00 147 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PLCD4Q9BRC7 762 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 ZNF552Q9H707 407 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 TNFRSF10DQ9UBN6 386 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 FHOD1Q9Y613 1164 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 PTCH2Q9Y6C5 1203 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 COL11A2P13942 1736 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 DDX60Q8IY21 1712 aaKnown RBP5.88□□□□□ -1.47
ATXN3-220ENST00000553491 FER1L6Q2WGJ9 1857 aa5.88□□□□□ -1.47
ATXN3-220ENST00000553491 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 H0Y8X5 98 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 AGRPO00253 132 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 TBX1O43435 398 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 CAPNS1P04632 268 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 ITGA4P13612 1032 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 NPR1P16066 1061 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 KCNA3P22001 575 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 FZD5Q13467 585 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 KIR3DS1Q14943 382 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 CEP128Q6ZU80 1094 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
ATXN3-220ENST00000553491 SLCO6A1Q86UG4 719 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 MASTLQ96GX5 879 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 RCC1LQ96I51 464 aaKnown RBP5.87□□□□□ -1.47
ATXN3-220ENST00000553491 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 SLC38A3Q99624 504 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 SLC6A17Q9H1V8 727 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 EPB41L4BQ9H329 900 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 DCP1AQ9NPI6 582 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-220ENST00000553491 CWC25Q9NXE8 425 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-220ENST00000553491 LRP2BPQ9P2M1 347 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 SUGT1Q9Y2Z0 365 aa5.87□□□□□ -1.47
ATXN3-220ENST00000553491 PXDNLA1KZ92 1463 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 UBN2Q6ZU65 1347 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 SH3TC1Q8TE82 1336 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 CDC45O75419 566 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 C1QTNF9P0C862 333 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 SRGNP10124 158 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 RTP1P59025 263 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 PPP2R2AP63151 447 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 LONRF2Q1L5Z9 754 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 HSF5Q4G112 596 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 NOL9Q5SY16 702 aaKnown RBP5.86□□□□□ -1.47
ATXN3-220ENST00000553491 FOXB2Q5VYV0 432 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 STYK1Q6J9G0 422 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 ARHGEF39Q8N4T4 335 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 APPBP2Q92624 585 aa5.86□□□□□ -1.47
ATXN3-220ENST00000553491 FRAT1Q92837 279 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms