RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 PRAMEF25A6NGN4 478 aa5.65□□□□□ -1.5
USP44-207ENST00000552237 PTGS2P35354 604 aa5.65□□□□□ -1.5
USP44-207ENST00000552237 RPUSD2Q8IZ73 545 aaKnown RBP5.65□□□□□ -1.5
USP44-207ENST00000552237 MPHOSPH9Q99550 1183 aa5.65□□□□□ -1.5
USP44-207ENST00000552237 Q9UFV3 132 aa5.65□□□□□ -1.5
USP44-207ENST00000552237 A0A1W2PRX2 142 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 GJB6O95452 261 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 CAPNS1P04632 268 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 GJA4P35212 333 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 COL10A1Q03692 680 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 SPTY2D1Q68D10 685 aaPredicted RBP5.64□□□□□ -1.51
USP44-207ENST00000552237 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 PTGFRNQ9P2B2 879 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 SRPK3Q9UPE1 567 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 ATP23Q9Y6H3 246 aa5.64□□□□□ -1.51
USP44-207ENST00000552237 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 PRODHO43272 600 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 RHOBTB3O94955 611 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 FGRP09769 529 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 FBLP22087 321 aaKnown RBP5.63□□□□□ -1.51
USP44-207ENST00000552237 ETFBP38117 255 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 RIN1Q13671 783 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 TRIM68Q6AZZ1 485 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 STYK1Q6J9G0 422 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 Q6ZPA2 131 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 ARHGAP36Q6ZRI8 547 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 DPH6Q7L8W6 267 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 MCF2L2Q86YR7 1114 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 SH3RF2Q8TEC5 729 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 WNK4Q96J92 1243 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 AARSD1Q9BTE6 412 aaKnown RBP5.63□□□□□ -1.51
USP44-207ENST00000552237 BTBD2Q9BX70 525 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 RIOX1Q9H6W3 641 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 HECAQ9UBI9 543 aaPredicted RBP5.63□□□□□ -1.51
USP44-207ENST00000552237 PRKAG3Q9UGI9 489 aa5.63□□□□□ -1.51
USP44-207ENST00000552237 GCP02774 474 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 MC4RP32245 332 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 STAT5BP51692 787 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 CD83Q01151 205 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 HAS1Q92839 578 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 ZNF408Q9H9D4 720 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 CATSPERZQ9NTU4 200 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 ZNHIT2Q9UHR6 403 aa5.62□□□□□ -1.51
USP44-207ENST00000552237 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
USP44-207ENST00000552237 BLACEA4D250 179 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 KRT15P19012 456 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 AOAHP28039 575 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 ADRA1BP35368 520 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 ECE1P42892 770 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 MAN2A2P49641 1150 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 HGFACQ04756 655 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
USP44-207ENST00000552237 STILQ15468 1287 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 GPR19Q15760 415 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 NTRK3Q16288 839 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 FIGNQ5HY92 759 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 GSPT2Q8IYD1 628 aaKnown RBP5.61□□□□□ -1.51
USP44-207ENST00000552237 MIEF2Q96C03 454 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 GMLQ99445 158 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 AGO3Q9H9G7 860 aaKnown RBP5.61□□□□□ -1.51
USP44-207ENST00000552237 GPRC5BQ9NZH0 403 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 SH3BP1Q9Y3L3 701 aa5.61□□□□□ -1.51
USP44-207ENST00000552237 TCRBV5S4A2TA0A5A2 114 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 IQCA1LA6NCM1 817 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 MASP2O00187 686 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 PABPC1P11940 636 aaKnown RBP5.6□□□□□ -1.51
USP44-207ENST00000552237 SCNN1GP51170 649 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 SLC25A3Q00325 362 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 MOGSQ13724 837 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 TMEM200BQ69YZ2 307 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 GRAMD4Q6IC98 578 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 NSMFQ6X4W1 530 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 Q6ZRM9 215 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 MTDHQ86UE4 582 aaKnown RBP5.6□□□□□ -1.51
USP44-207ENST00000552237 SYNE4Q8N205 404 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 TANGO6Q9C0B7 1094 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 OR10A5Q9H207 317 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 UCKL1Q9NWZ5 548 aa5.6□□□□□ -1.51
USP44-207ENST00000552237 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
USP44-207ENST00000552237 TRAF5O00463 557 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
USP44-207ENST00000552237 FGFR1P11362 822 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 ST5P78524 1137 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 PAK1Q13153 545 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 ZKSCAN2Q63HK3 967 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 PTRH1Q86Y79 214 aaKnown RBP5.59□□□□□ -1.51
USP44-207ENST00000552237 GPR150Q8NGU9 434 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 SLC25A43Q8WUT9 341 aaPredicted RBP5.59□□□□□ -1.51
USP44-207ENST00000552237 ZNF764Q96H86 408 aaPredicted RBP5.59□□□□□ -1.51
USP44-207ENST00000552237 SGSM3Q96HU1 749 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 C8orf37Q96NL8 207 aa5.59□□□□□ -1.51
USP44-207ENST00000552237 ADARB2Q9NS39 739 aaKnown RBP5.59□□□□□ -1.51
USP44-207ENST00000552237 MAN2B1O00754 1011 aa5.58□□□□□ -1.52
USP44-207ENST00000552237 FAM20BO75063 409 aa5.58□□□□□ -1.52
USP44-207ENST00000552237 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
USP44-207ENST00000552237 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
USP44-207ENST00000552237 HERVK_113P62684 666 aa5.58□□□□□ -1.52
USP44-207ENST00000552237 MBNL2Q5VZF2 373 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms