RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SEPT8Q92599 483 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 APBB2Q92870 758 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 TRPV2Q9Y5S1 764 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 H3BQV1 296 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 MCM7P33993 719 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 IKBKEQ14164 716 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 TIFAQ96CG3 184 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 NIFKQ9BYG3 293 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 ZNF576Q9H609 170 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 SQORQ9Y6N5 450 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
PRPF40B-211ENST00000551063 TET1Q8NFU7 2136 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 STBD1O95210 358 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 TCTN1Q2MV58 587 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 FBXO47Q5MNV8 452 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 SNX21Q969T3 373 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 LXNQ9BS40 222 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
PRPF40B-211ENST00000551063 GRXCR1A8MXD5 290 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 GHRP10912 638 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 TMOD1P28289 359 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 TXKP42681 527 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 LPIN1Q14693 890 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 GRIN2CQ14957 1233 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 LARP1BQ659C4 914 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 MSRAQ9UJ68 235 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 PCDHA11Q9Y5I1 949 aa17.29■□□□□ 0.36
PRPF40B-211ENST00000551063 LYPLA2O95372 231 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 PDCP20941 246 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 ZNF174Q15697 407 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 MTERF2Q49AM1 385 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 ANO5Q75V66 913 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 HERC6Q8IVU3 1022 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 EIF2AK1Q9BQI3 630 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 OSBPL7Q9BZF2 842 aa17.28■□□□□ 0.36
PRPF40B-211ENST00000551063 DDX11L8A8MPP1 907 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 PBX2P40425 430 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 EFCAB12Q6NXP0 572 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 DYDC2Q96IM9 177 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 CEP89Q96ST8 783 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 HSD17B14Q9BPX1 270 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 RGL1Q9NZL6 768 aa17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 WRAP73Q9P2S5 460 aaPredicted RBP17.27■□□□□ 0.36
PRPF40B-211ENST00000551063 LAMA2P24043 3122 aaKnown RBP17.27■□□□□ 0.35
PRPF40B-211ENST00000551063 IGKV6-21A0A0C4DH24 114 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 POTEMA6NI47 508 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 LAD1O00515 517 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 SLITRK3O94933 977 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 AMHP03971 560 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 YWHABP31946 246 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 CLCN3P51790 818 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 DEFB103AP81534 67 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 NBR1Q14596 966 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 OTUD6AQ7L8S5 288 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 GAS2L1Q99501 681 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 CYP26B1Q9NR63 512 aa17.26■□□□□ 0.35
PRPF40B-211ENST00000551063 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms