RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 GOLGA8BA8MQT2 603 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 BACH1O14867 736 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 DHX15O43143 795 aaKnown RBP14.62□□□□□ -0.07
PTCH1-221ENST00000550914 TBX10O75333 385 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 EYA4O95677 639 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 DNAJB1P25685 340 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 UBE3AQ05086 875 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 KIAA0319LQ8IZA0 1049 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 KLHL23Q8NBE8 558 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 CRYGNQ8WXF5 182 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 MSLNLQ96KJ4 702 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 ERVK-5Q9HDB9 667 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 C1orf112Q9NSG2 853 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 FAM217BQ9NTX9 383 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-221ENST00000550914 ZDBF2Q9HCK1 2354 aa14.62□□□□□ -0.07
PTCH1-221ENST00000550914 IGLV3-22A0A075B6J6 115 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 KLF18A0A0U1RQI7 1052 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 IPO5O00410 1097 aaKnown RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 RPS6KA5O75582 802 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 GTF2F1P35269 517 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 IRS1P35568 1242 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PFKFB3Q16875 520 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PAN2Q504Q3 1202 aaKnown RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 MIS18BP1Q6P0N0 1132 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PDXDC2PQ6P474 469 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 SLC24A5Q71RS6 500 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 CCDC60Q8IWA6 550 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 CCDC12Q8WUD4 166 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-221ENST00000550914 POF1BQ8WVV4 589 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 ZMYND12Q9H0C1 365 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 IGFLR1Q9H665 355 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 ZNF302Q9NR11 478 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 RGS18Q9NS28 235 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 TBC1D22BQ9NU19 505 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PCDHB7Q9Y5E2 793 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 PCDHB12Q9Y5F1 795 aa14.61□□□□□ -0.07
PTCH1-221ENST00000550914 DENND3A2RUS2 1198 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 GPR182O15218 404 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 LINC01565O15544 149 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 CDC27P30260 824 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 NDUFV1P49821 464 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 CRYBB1P53674 252 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 NFX1Q12986 1120 aaKnown RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 COASYQ13057 564 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 CLUL1Q15846 466 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 TMEM266Q2M3C6 531 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 ADCK5Q3MIX3 580 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 ZNF746Q6NUN9 644 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 SMRP1Q8NCR6 262 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 TCEANC2Q96MN5 208 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 UIMC1Q96RL1 719 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 MAFBQ9Y5Q3 323 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-221ENST00000550914 NID2Q14112 1375 aa14.6□□□□□ -0.07
PTCH1-221ENST00000550914 C9IYK1 514 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
PTCH1-221ENST00000550914 MGEA5O60502 916 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 C22orf31O95567 290 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ATP4AP20648 1035 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 JAKMIP3Q5VZ66 844 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
PTCH1-221ENST00000550914 SWSAP1Q6NVH7 229 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ADGRD2Q7Z7M1 963 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 REXO1Q8N1G1 1221 aaKnown RBP14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ADAM2Q99965 735 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ZNF577Q9BSK1 485 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ELAC1Q9H777 363 aaKnown RBP14.59□□□□□ -0.07
PTCH1-221ENST00000550914 CDHR5Q9HBB8 845 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 CLEC1BQ9P126 229 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 CEP131Q9UPN4 1083 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 GINS2Q9Y248 185 aa14.59□□□□□ -0.07
PTCH1-221ENST00000550914 CACNA1HO95180 2353 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 MAGEB2O15479 319 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 PSAPP07602 524 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 GNA11P29992 359 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 ADD1P35611 737 aaKnown RBP14.58□□□□□ -0.08
PTCH1-221ENST00000550914 NRIP1P48552 1158 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCH1-221ENST00000550914 FAM189BP81408 668 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 RNF135Q8IUD6 432 aa14.58□□□□□ -0.08
PTCH1-221ENST00000550914 CKAP2LQ8IYA6 745 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms