RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C11orf84Q9BUA3 381 aaPredicted RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 PADI3Q9ULW8 664 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 IGSF9BQ9UPX0 1349 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 IGLV3-22A0A075B6J6 115 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 ESYT2A0FGR8 921 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 CPLX1O14810 134 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 HBP1O60381 514 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 CDKL5O76039 1030 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 SLC26A2P50443 739 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 SETQ01105 290 aaPredicted RBP15.18■□□□□ 0.02
NUP188-211ENST00000550219 KRT76Q01546 638 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 LEXMQ3ZCV2 418 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 PTCRAQ6ISU1 281 aaPredicted RBP15.18■□□□□ 0.02
NUP188-211ENST00000550219 ABHD15Q6UXT9 468 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
NUP188-211ENST00000550219 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 SLC26A6Q9BXS9 759 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 FTHL17Q9BXU8 183 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
NUP188-211ENST00000550219 ZMYND12Q9H0C1 365 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 EPHX3Q9H6B9 360 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 RC3H2Q9HBD1 1191 aaKnown RBP15.18■□□□□ 0.02
NUP188-211ENST00000550219 CLDND1Q9NY35 253 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 RWDD3Q9Y3V2 267 aa15.18■□□□□ 0.02
NUP188-211ENST00000550219 STK36Q9NRP7 1315 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 IGKV6D-21A0A0A0MT36 114 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 GRM6O15303 877 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 DGKIO75912 1065 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 ATG7O95352 703 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 LINC00271P0C7V0 271 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 KLRC1P26715 233 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 SSTR3P32745 418 aaPredicted RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 BMPR1AP36894 532 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 GATMP50440 423 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 NFX1Q12986 1120 aaKnown RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 PKN1Q16512 942 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 PRR16Q569H4 304 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 SWSAP1Q6NVH7 229 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.022e-8■□□□□ 8.6
NUP188-211ENST00000550219 C1QTNF1Q9BXJ1 281 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 LRFN2Q9ULH4 789 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 MRPL42Q9Y6G3 142 aaKnown RBP15.17■□□□□ 0.02
NUP188-211ENST00000550219 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 ATG2AQ2TAZ0 1938 aa15.17■□□□□ 0.02
NUP188-211ENST00000550219 COL1A2P08123 1366 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 C5orf67F2Z3F1 127 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 DHX15O43143 795 aaKnown RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 RB1P06400 928 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 CYP3A4P08684 503 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 GNA11P29992 359 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 RTN4RL1Q86UN2 441 aaPredicted RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 CRYGNQ8WXF5 182 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 CD320Q9NPF0 282 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 SAMM50Q9Y512 469 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.16■□□□□ 0.02
NUP188-211ENST00000550219 SQORQ9Y6N5 450 aa15.16■□□□□ 0.02
NUP188-211ENST00000550219 FAM86C2PA6NEL3 165 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 CHMP2AO43633 222 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 JAK2O60674 1132 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 RPS6KA5O75582 802 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 CLUL1Q15846 466 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 ZNF484Q5JVG2 852 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 MCTP2Q6DN12 878 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 METTL13Q8N6R0 699 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 CLP1Q92989 425 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 OSMRQ99650 979 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 CDHR5Q9HBB8 845 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 NOC2LQ9Y3T9 749 aaKnown RBP15.15■□□□□ 0.02
NUP188-211ENST00000550219 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
NUP188-211ENST00000550219 LOXHD1Q8IVV2 1947 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 DENND3A2RUS2 1198 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 MGEA5O60502 916 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 C22orf31O95567 290 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 MMP1P03956 469 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 VTNP04004 478 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 PSAPP07602 524 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 ATP4AP20648 1035 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 KIZQ2M2Z5 673 aa15.14■□□□□ 0.01
NUP188-211ENST00000550219 SPOUT1Q5T280 376 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms