RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 HFE2Q6ZVN8 426 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
RAB5C-205ENST00000550013 ALYREFQ86V81 257 aaKnown RBP17.55■□□□□ 0.4
RAB5C-205ENST00000550013 SKAP1Q86WV1 359 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 RNF135Q8IUD6 432 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 CCDC60Q8IWA6 550 aaPredicted RBP17.55■□□□□ 0.4
RAB5C-205ENST00000550013 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 ATP8B4Q8TF62 1192 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 PPP1R16BQ96T49 567 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 BARHL2Q9NY43 387 aa17.55■□□□□ 0.4
RAB5C-205ENST00000550013 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 FAM86B1E9PN63 330 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 HBP1O60381 514 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 RPS6KA5O75582 802 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 GLP2RO95838 553 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 FAM86B2P0C5J1 330 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 SLC26A2P50443 739 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 JAKMIP3Q5VZ66 844 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 FAM160B1Q5W0V3 765 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 PLA2G4DQ86XP0 818 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 PPP2R3CQ969Q6 453 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
RAB5C-205ENST00000550013 HCSTQ9UBK5 93 aa17.54■□□□□ 0.4
RAB5C-205ENST00000550013 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 KLF18A0A0U1RQI7 1052 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 ADAMTS3O15072 1205 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 DHX15O43143 795 aaKnown RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 EYA4O95677 639 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 ATP4AP20648 1035 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 CDC27P30260 824 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 HERC4Q5GLZ8 1057 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 SPOUT1Q5T280 376 aaKnown RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 PDXDC2PQ6P474 469 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 NIPA1Q7RTP0 329 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 TEX2Q8IWB9 1127 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 ADAM2Q99965 735 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 ZNF302Q9NR11 478 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 BARX2Q9UMQ3 279 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-205ENST00000550013 PCDHB7Q9Y5E2 793 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 COL1A2P08123 1366 aa17.53■□□□□ 0.4
RAB5C-205ENST00000550013 IGLV3-22A0A075B6J6 115 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 DENND3A2RUS2 1198 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 RBM10P98175 930 aaKnown RBP17.52■□□□□ 0.4
RAB5C-205ENST00000550013 KIZQ2M2Z5 673 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 ZNF484Q5JVG2 852 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 MIS18BP1Q6P0N0 1132 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 SMRP1Q8NCR6 262 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 RGS18Q9NS28 235 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.4
RAB5C-205ENST00000550013 C9IYK1 514 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 IPO5O00410 1097 aaKnown RBP17.51■□□□□ 0.39
RAB5C-205ENST00000550013 PER2O15055 1255 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 C22orf31O95567 290 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 NHLH1Q02575 133 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 COASYQ13057 564 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 TRMT1LQ7Z2T5 733 aaKnown RBP17.51■□□□□ 0.39
RAB5C-205ENST00000550013 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 CRYGNQ8WXF5 182 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 OSMRQ99650 979 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 TLE6Q9H808 572 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 C1orf112Q9NSG2 853 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 NAP1L2Q9ULW6 460 aaPredicted RBP17.51■□□□□ 0.39
RAB5C-205ENST00000550013 PCDHB12Q9Y5F1 795 aa17.51■□□□□ 0.39
RAB5C-205ENST00000550013 VTNP04004 478 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 CYP3A4P08684 503 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 FGFR1P11362 822 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 ADD1P35611 737 aaKnown RBP17.5■□□□□ 0.39
RAB5C-205ENST00000550013 ERVFC1P60507 584 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
RAB5C-205ENST00000550013 SLC24A5Q71RS6 500 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 COLGALT1Q8NBJ5 622 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 ZNF577Q9BSK1 485 aa17.5■□□□□ 0.39
RAB5C-205ENST00000550013 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
RAB5C-205ENST00000550013 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
RAB5C-205ENST00000550013 LOC730098B7Z3J9 87 aa17.49■□□□□ 0.39
RAB5C-205ENST00000550013 GPR182O15218 404 aa17.49■□□□□ 0.39
RAB5C-205ENST00000550013 FGF18O76093 207 aa17.49■□□□□ 0.39
RAB5C-205ENST00000550013 CPA1P15085 419 aa17.49■□□□□ 0.39
RAB5C-205ENST00000550013 CRYBB1P53674 252 aaPredicted RBP17.49■□□□□ 0.39
RAB5C-205ENST00000550013 TSGA10IPQ3SY00 556 aa17.49■□□□□ 0.39
RAB5C-205ENST00000550013 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms