RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TBX10O75333 385 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 EYA4O95677 639 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 DNAJB1P25685 340 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 UBE3AQ05086 875 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 KIAA0319LQ8IZA0 1049 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 KLHL23Q8NBE8 558 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 CRYGNQ8WXF5 182 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 MSLNLQ96KJ4 702 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 ERVK-5Q9HDB9 667 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 C1orf112Q9NSG2 853 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 FAM217BQ9NTX9 383 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-218ENST00000548945 ZDBF2Q9HCK1 2354 aa14.62□□□□□ -0.07
PTCH1-218ENST00000548945 IGLV3-22A0A075B6J6 115 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 KLF18A0A0U1RQI7 1052 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 IPO5O00410 1097 aaKnown RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 RPS6KA5O75582 802 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 GTF2F1P35269 517 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 IRS1P35568 1242 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PFKFB3Q16875 520 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PAN2Q504Q3 1202 aaKnown RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 MIS18BP1Q6P0N0 1132 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PDXDC2PQ6P474 469 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 SLC24A5Q71RS6 500 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 CCDC60Q8IWA6 550 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 CCDC12Q8WUD4 166 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-218ENST00000548945 POF1BQ8WVV4 589 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 ZMYND12Q9H0C1 365 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 IGFLR1Q9H665 355 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 ZNF302Q9NR11 478 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 RGS18Q9NS28 235 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 TBC1D22BQ9NU19 505 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PCDHB7Q9Y5E2 793 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 PCDHB12Q9Y5F1 795 aa14.61□□□□□ -0.07
PTCH1-218ENST00000548945 DENND3A2RUS2 1198 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 GPR182O15218 404 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 LINC01565O15544 149 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 NEFLP07196 543 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 CDC27P30260 824 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 NDUFV1P49821 464 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 CRYBB1P53674 252 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 NFX1Q12986 1120 aaKnown RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 COASYQ13057 564 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 CLUL1Q15846 466 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 TMEM266Q2M3C6 531 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 ADCK5Q3MIX3 580 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 ZNF746Q6NUN9 644 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 SMRP1Q8NCR6 262 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 TCEANC2Q96MN5 208 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 UIMC1Q96RL1 719 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 MAFBQ9Y5Q3 323 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-218ENST00000548945 NID2Q14112 1375 aa14.6□□□□□ -0.07
PTCH1-218ENST00000548945 C9IYK1 514 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
PTCH1-218ENST00000548945 MGEA5O60502 916 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 C22orf31O95567 290 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ATP4AP20648 1035 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 JAKMIP3Q5VZ66 844 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
PTCH1-218ENST00000548945 SWSAP1Q6NVH7 229 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ADGRD2Q7Z7M1 963 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 REXO1Q8N1G1 1221 aaKnown RBP14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ADAM2Q99965 735 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ZNF577Q9BSK1 485 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ELAC1Q9H777 363 aaKnown RBP14.59□□□□□ -0.07
PTCH1-218ENST00000548945 CDHR5Q9HBB8 845 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 CLEC1BQ9P126 229 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 CEP131Q9UPN4 1083 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 GINS2Q9Y248 185 aa14.59□□□□□ -0.07
PTCH1-218ENST00000548945 CACNA1HO95180 2353 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 MAGEB2O15479 319 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 PSAPP07602 524 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 GNA11P29992 359 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 ADD1P35611 737 aaKnown RBP14.58□□□□□ -0.08
PTCH1-218ENST00000548945 NRIP1P48552 1158 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCH1-218ENST00000548945 FAM189BP81408 668 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 RNF135Q8IUD6 432 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 CKAP2LQ8IYA6 745 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 FBXL16Q8N461 479 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 TMEM40Q8WWA1 233 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 CDCA3Q99618 268 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms