RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 HYAL1Q12794 435 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 TOB2Q14106 344 aaPredicted RBP21.19■□□□□ 0.98
CHERP-204ENST00000546538 CTC1Q2NKJ3 1217 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 NPAS4Q8IUM7 802 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 NME8Q8N427 588 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 C11orf84Q9BUA3 381 aaPredicted RBP21.19■□□□□ 0.98
CHERP-204ENST00000546538 FTHL17Q9BXU8 183 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 C6orf50Q9HD87 102 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 ALG13Q9NP73 1137 aaKnown RBP21.19■□□□□ 0.98
CHERP-204ENST00000546538 VPS54Q9P1Q0 977 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 MYH9P35579 1960 aaKnown RBP21.19■□□□□ 0.98
CHERP-204ENST00000546538 COL1A2P08123 1366 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 CCT2P78371 535 aaKnown RBP21.18■□□□□ 0.98
CHERP-204ENST00000546538 PAN2Q504Q3 1202 aaKnown RBP21.18■□□□□ 0.98
CHERP-204ENST00000546538 PRR16Q569H4 304 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 FAM160B1Q5W0V3 765 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 MIS18BP1Q6P0N0 1132 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 CMTR2Q8IYT2 770 aaKnown RBP21.18■□□□□ 0.98
CHERP-204ENST00000546538 PPP1R16BQ96T49 567 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 LRFN3Q9BTN0 628 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 C1QTNF1Q9BXJ1 281 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 RNF26Q9BY78 433 aaPredicted RBP21.18■□□□□ 0.98
CHERP-204ENST00000546538 PLAGL2Q9UPG8 496 aa21.18■□□□□ 0.98
CHERP-204ENST00000546538 M0QZ92 97 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 CSPG5O95196 566 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 MMP1P03956 469 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 IFNAR1P17181 557 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 SETQ01105 290 aaPredicted RBP21.17■□□□□ 0.98
CHERP-204ENST00000546538 ZNF484Q5JVG2 852 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 ZNF746Q6NUN9 644 aaPredicted RBP21.17■□□□□ 0.98
CHERP-204ENST00000546538 TNPO1Q92973 898 aaKnown RBP21.17■□□□□ 0.98
CHERP-204ENST00000546538 GJA10Q969M2 543 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 SLC26A6Q9BXS9 759 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 TBC1D22BQ9NU19 505 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 HCSTQ9UBK5 93 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 GINS2Q9Y248 185 aa21.17■□□□□ 0.98
CHERP-204ENST00000546538 FNDC1Q4ZHG4 1894 aaPredicted RBP21.17■□□□□ 0.98
CHERP-204ENST00000546538 PLXNA4Q9HCM2 1894 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 ZNF862O60290 1169 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 GPR32O75388 356 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 ITGB1P05556 798 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 TRMT1LQ7Z2T5 733 aaKnown RBP21.16■□□□□ 0.98
CHERP-204ENST00000546538 LINC01465Q8N7H1 131 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
CHERP-204ENST00000546538 PLVAPQ9BX97 442 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 LMAN2LQ9H0V9 348 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 CLDND1Q9NY35 253 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 RWDD3Q9Y3V2 267 aa21.16■□□□□ 0.98
CHERP-204ENST00000546538 FAM86C2PA6NEL3 165 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 PI4K2BG5E9Z4 385 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 MSH4O15457 936 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 LINC01565O15544 149 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 TBX10O75333 385 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 VTNP04004 478 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 IRS1P35568 1242 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 NFX1Q12986 1120 aaKnown RBP21.15■□□□□ 0.98
CHERP-204ENST00000546538 UGCGQ16739 394 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 KIZQ2M2Z5 673 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 FAM228AQ86W67 206 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 GJD3Q8N144 294 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 SPPL3Q8TCT6 385 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 CCDC12Q8WUD4 166 aaPredicted RBP21.15■□□□□ 0.98
CHERP-204ENST00000546538 BBXQ8WY36 941 aaPredicted RBP21.15■□□□□ 0.98
CHERP-204ENST00000546538 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 ZSWIM6Q9HCJ5 1215 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 GABBR1Q9UBS5 961 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 ST3GAL5Q9UNP4 418 aa21.15■□□□□ 0.98
CHERP-204ENST00000546538 RPS6KA5O75582 802 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 GNA11P29992 359 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 SARSP49591 514 aaKnown RBP21.14■□□□□ 0.98
CHERP-204ENST00000546538 NPY5RQ15761 445 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 RUFY3Q7L099 469 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 ADGRD2Q7Z7M1 963 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 SMAP1Q8IYB5 467 aaPredicted RBP21.14■□□□□ 0.98
CHERP-204ENST00000546538 KLHL23Q8NBE8 558 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 P2RX5Q93086 422 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 OSMRQ99650 979 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 PCDHGC5Q9Y5F6 944 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 PCDHA10Q9Y5I2 948 aa21.14■□□□□ 0.98
CHERP-204ENST00000546538 C9IYK1 514 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 IBSPP21815 317 aaPredicted RBP21.13■□□□□ 0.97
CHERP-204ENST00000546538 CLCN3P51790 818 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 FAM102BQ5T8I3 360 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 MCTP2Q6DN12 878 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 ADAM2Q99965 735 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 RGS18Q9NS28 235 aa21.13■□□□□ 0.97
CHERP-204ENST00000546538 M0R2N6 131 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 REC8O95072 547 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 ZP2Q05996 745 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 DSC3Q14574 896 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 CLUL1Q15846 466 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 CKAP2LQ8IYA6 745 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 SLC5A5Q92911 643 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 AIFM3Q96NN9 605 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 WDFY4Q6ZS81 3184 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 PSAPP07602 524 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 STAG3L1P0CL83 205 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 PSMA5P28066 241 aa21.12■□□□□ 0.97
CHERP-204ENST00000546538 CRYBB1P53674 252 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms