RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 C19orf81C9J6K1 198 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
CCDC38-202ENST00000546386 RARRES1P49788 294 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 EPHA7Q15375 998 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 FKBP15Q5T1M5 1219 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 NSUN6Q8TEA1 469 aaKnown RBP13.18□□□□□ -0.3
CCDC38-202ENST00000546386 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-202ENST00000546386 TPM2P07951 284 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 HERVK_113P62684 666 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 DLG4P78352 724 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 CNGA4Q8IV77 575 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 KIF18AQ8NI77 898 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 LSM14BQ9BX40 385 aaKnown RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 RPTORQ8N122 1335 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 NR3C1P04150 777 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 P4HBP07237 508 aaKnown RBP13.17□□□□□ -0.3
CCDC38-202ENST00000546386 CACNA2D4Q7Z3S7 1137 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 TMEM143Q96AN5 459 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
CCDC38-202ENST00000546386 CCND2P30279 289 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 TRAF1Q13077 416 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 MAPK7Q13164 816 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 LACRTQ9GZZ8 138 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 GJB1P08034 283 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 CCDC175P0C221 793 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 GFPT1Q06210 699 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF720Q7Z2F6 126 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 NHEJ1Q9H9Q4 299 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-202ENST00000546386 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
CCDC38-202ENST00000546386 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 CETN3O15182 167 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 SRGAP2O75044 1071 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ARIH2O95376 493 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ACTR2P61160 394 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 PSMD2Q13200 908 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 CCDC127Q96BQ5 260 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 RIT2Q99578 217 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 SIK3Q9Y2K2 1263 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 EPN1Q9Y6I3 576 aaPredicted RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ZMYM2Q9UBW7 1377 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF263O14978 683 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 KCNA2P16389 499 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 NF2P35240 595 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 DRP2Q13474 957 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 TSR1Q2NL82 804 aaKnown RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 LMBRD2Q68DH5 695 aaPredicted RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 JPH1Q9HDC5 661 aaPredicted RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ARMCX3Q9UH62 379 aaPredicted RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
CCDC38-202ENST00000546386 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 ADAMTS5Q9UNA0 930 aa13.15□□□□□ -0.3
CCDC38-202ENST00000546386 NDUFA10O95299 355 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms